Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z6G entry

There are 4 chains in PDB entry 6Z6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
U
 A 1 C 10
X
 G 9 C 13
H
 G 4 U 16
A
 TYR -3MET 2251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 6Z6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
18 46Right-handed alpha
Helix 3
AA3
A
54 63Right-handed alpha
Helix 4
AA4
A
99 121Right-handed alpha
Helix 5
AA5
A
161 172Right-handed alpha
Helix 6
AA6
A
198 202Right-handed 310
Helix 7
AA7
A
204 214Right-handed alpha
Helix 8
AA8
A
215 227Right-handed alpha
Helix 9
AA9
A
237 261Right-handed alpha
Helix 10
AB1
A
273 290Right-handed alpha
Helix 11
AB2
A
297 301Right-handed 310
Helix 12
AB3
A
319 333Right-handed alpha
Helix 13
AB4
A
340 350Right-handed alpha
Helix 14
AB5
A
357 373Right-handed alpha
Helix 15
AB6
A
407 417Right-handed alpha
Helix 16
AB7
A
447 466Right-handed alpha
Helix 17
AB8
A
475 489Right-handed alpha
Helix 18
AB9
A
489 502Right-handed alpha
Helix 19
AC1
A
502 522Right-handed alpha
Helix 20
AC2
A
598 606Right-handed alpha
Helix 21
AC3
A
606 620Right-handed alpha
Helix 22
AC4
A
626 639Right-handed alpha
Helix 23
AC5
A
642 661Right-handed alpha
Helix 24
AC6
A
665 673Right-handed alpha
Helix 25
AC7
A
680 700Right-handed alpha
Helix 26
AC8
A
701 704Right-handed 310
Helix 27
AC9
A
737 747Right-handed alpha
Helix 28
AD1
A
748 752Right-handed 310
Helix 29
AD2
A
758 781Right-handed alpha
Helix 30
AD3
A
796 814Right-handed alpha
Helix 31
AD4
A
816 825Right-handed alpha
Helix 32
AD5
A
830 834Right-handed 310
Helix 33
AD6
A
849 870Right-handed alpha
Helix 34
AD7
A
893 899Right-handed alpha
Helix 35
AD8
A
910 921Right-handed alpha
Helix 36
AD9
A
928 940Right-handed alpha
Helix 37
AE1
A
964 983Right-handed alpha
Helix 38
AE2
A
996 1020Right-handed alpha
Helix 39
AE3
A
1020 1031Right-handed alpha
Helix 40
AE4
A
1040 1047Right-handed alpha
Helix 41
AE5
A
1071 1079Right-handed alpha
Helix 42
AE6
A
1084 1099Right-handed alpha
Helix 43
AE7
A
1106 1115Right-handed alpha
Helix 44
AE8
A
1123 1129Right-handed alpha
Helix 45
AE9
A
1148 1174Right-handed alpha
Helix 46
AF1
A
1201 1219Right-handed alpha
Helix 47
AF2
A
1252 1259Right-handed alpha
Helix 48
AF3
A
1267 1285Right-handed alpha
Helix 49
AF4
A
1288 1307Right-handed alpha
Helix 50
AF5
A
1316 1320Right-handed 310
Helix 51
AF6
A
1325 1329Right-handed 310
Helix 52
AF7
A
1330 1334Right-handed 310
Helix 53
AF8
A
1340 1347Right-handed alpha
Helix 54
AF9
A
1350 1365Right-handed alpha
Helix 55
AG1
A
1366 1370Right-handed 310
Helix 56
AG2
A
1373 1379Right-handed alpha
Helix 57
AG3
A
1380 1384Right-handed 310
Helix 58
AG4
A
1390 1403Right-handed alpha
Helix 59
AG5
A
1441 1452Right-handed alpha
Helix 60
AG6
A
1456 1466Right-handed alpha
Helix 61
AG7
A
1467 1472Right-handed 310
Helix 62
AG8
A
1477 1488Right-handed alpha
Helix 63
AG9
A
1491 1498Right-handed alpha
Helix 64
AH1
A
1502 1513Right-handed alpha
Helix 65
AH2
A
1521 1526Right-handed alpha
Helix 66
AH3
A
1548 1561Right-handed alpha
Helix 67
AH4
A
1566 1578Right-handed alpha
Helix 68
AH5
A
1581 1593Right-handed alpha
Helix 69
AH6
A
1623 1633Right-handed alpha
Helix 70
AH7
A
1647 1658Right-handed alpha
Helix 71
AH8
A
1662 1677Right-handed alpha
Helix 72
AH9
A
1681 1700Right-handed alpha
Helix 73
AI1
A
1717 1729Right-handed alpha
Helix 74
AI2
A
1752 1779Right-handed alpha
Helix 75
AI3
A
1784 1794Right-handed alpha
Helix 76
AI4
A
1802 1812Right-handed alpha
Helix 77
AI5
A
1814 1817Right-handed 310
Helix 78
AI6
A
1818 1826Right-handed alpha
Helix 79
AI7
A
1829 1840Right-handed alpha
Helix 80
AI8
A
1892 1904Right-handed alpha
Helix 81
AI9
A
1944 1955Right-handed alpha
Helix 82
AJ1
A
2014 2019Right-handed 310
Helix 83
AJ2
A
2033 2038Right-handed alpha
Helix 84
AJ3
A
2047 2052Right-handed alpha
Helix 85
AJ4
A
2054 2059Right-handed alpha
Helix 86
AJ5
A
2069 2074Right-handed alpha
Helix 87
AJ6
A
2109 2129Right-handed alpha
Helix 88
AJ7
A
2138 2153Right-handed alpha
Helix 89
AJ8
A
2158 2175Right-handed alpha
Helix 90
AJ9
A
2177 2183Right-handed alpha
Helix 91
AK1
A
2200 2210Right-handed alpha
Helix 92
AK2
A
2218 2238Right-handed alpha
Helix 93
AK3
A
2246 2251Right-handed alpha
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There are 18 sheets in PDB entry 6Z6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
87 94anti-parallel
Strand 3
A
124 131parallel
Strand 4
A
138 140anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
441 443parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
398 400anti-parallel
Strand 4
A
529 534anti-parallel
Strand 5
A
540 544anti-parallel
Strand 6
A
556 565anti-parallel
Strand 7
A
586 591anti-parallel
Strand 8
A
577 583anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 387first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
398 400anti-parallel
Strand 4
A
529 534anti-parallel
Strand 5
A
540 544anti-parallel
Strand 6
A
556 565anti-parallel
Strand 7
A
594 597anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
716 718first strand
Strand 2
A
709 711anti-parallel
Strand 3
A
2096 2100parallel
Strand 4
A
2086 2090anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
727 728first strand
Strand 2
A
735 736anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
785 786first strand
Strand 2
A
794 795parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
845 847first strand
Strand 2
A
905 907anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
959 963first strand
Strand 2
A
944 949anti-parallel
Strand 3
A
1102 1104parallel
Strand 4
A
1136 1138anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1177 1184first strand
Strand 2
A
1188 1197anti-parallel
Strand 3
A
1051 1060anti-parallel
Strand 4
A
1230 1232anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1236 1238first strand
Strand 2
A
1241 1243anti-parallel
Strand 3
A
1248 1249anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1594 1596first strand
Strand 2
A
1738 1740anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1606 1609first strand
Strand 2
A
1708 1711anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1800 1801first strand
Strand 2
A
1796 1797anti-parallel
Strand 3
A
2021 2022anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1862 1867first strand
Strand 2
A
1870 1876anti-parallel
Strand 3
A
1881 1888anti-parallel
Strand 4
A
1968 1975parallel
Strand 5
A
1925 1927anti-parallel
Strand 6
A
1941 1943anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1930 1932first strand
Strand 2
A
1936 1938anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1999 2001first strand
Strand 2
A
2007 2009anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2027 2028first strand
Strand 2
A
2031 2032anti-parallel
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