Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z6P entry

There are 14 chains in PDB entry 6Z6P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	ARG 40	GLU 700
L	GLU 29	GLU 700
M	SER 28	GLN 639
N	LYS 10	LEU 638
A	PRO 38	ARG 134
B	LYS 20	GLY 102
C	THR 16	LYS 118
D	LYS 28	LYS 122
E	HIS 39	ALA 135
F	ASN 25	GLY 102
G	ALA 14	LYS 118
H	THR 29	ALA 121
I	A -72	T 72
J	A -72	T 72

There are116 helices in PDB entry 6Z6P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	76	81	Right-handed alpha
Helix 2	AA2	K	88	99	Right-handed alpha
Helix 3	AA3	K	130	134	Right-handed 310
Helix 4	AA4	K	136	146	Right-handed alpha
Helix 5	AA5	K	150	161	Right-handed alpha
Helix 6	AA6	K	171	190	Right-handed alpha
Helix 7	AA7	K	220	232	Right-handed alpha
Helix 8	AA8	K	249	254	Right-handed alpha
Helix 9	AA9	K	255	257	Right-handed 310
Helix 10	AB1	K	289	293	Right-handed 310
Helix 11	AB2	K	307	326	Right-handed alpha
Helix 12	AB3	K	351	366	Right-handed alpha
Helix 13	AB4	K	381	396	Right-handed alpha
Helix 14	AB5	K	410	415	Right-handed alpha
Helix 15	AB6	K	417	428	Right-handed alpha
Helix 16	AB7	K	429	432	Right-handed 310
Helix 17	AB8	K	458	472	Right-handed alpha
Helix 18	AB9	K	534	544	Right-handed alpha
Helix 19	AC1	K	562	578	Right-handed alpha
Helix 20	AC2	K	598	607	Right-handed alpha
Helix 21	AC3	K	636	645	Right-handed alpha
Helix 22	AC4	K	679	687	Right-handed alpha
Helix 23	AC5	K	687	699	Right-handed alpha
Helix 24	AC6	L	63	68	Right-handed 310
Helix 25	AC7	L	88	100	Right-handed alpha
Helix 26	AC8	L	127	132	Right-handed alpha
Helix 27	AC9	L	136	147	Right-handed alpha
Helix 28	AD1	L	150	161	Right-handed alpha
Helix 29	AD2	L	170	184	Right-handed alpha
Helix 30	AD3	L	184	191	Right-handed alpha
Helix 31	AD4	L	221	226	Right-handed alpha
Helix 32	AD5	L	226	232	Right-handed alpha
Helix 33	AD6	L	249	254	Right-handed alpha
Helix 34	AD7	L	271	274	Right-handed 310
Helix 35	AD8	L	307	318	Right-handed alpha
Helix 36	AD9	L	318	327	Right-handed alpha
Helix 37	AE1	L	338	340	Right-handed 310
Helix 38	AE2	L	351	361	Right-handed alpha
Helix 39	AE3	L	381	395	Right-handed alpha
Helix 40	AE4	L	410	421	Right-handed alpha
Helix 41	AE5	L	422	427	Right-handed 310
Helix 42	AE6	L	456	474	Right-handed alpha
Helix 43	AE7	L	532	543	Right-handed alpha
Helix 44	AE8	L	564	580	Right-handed alpha
Helix 45	AE9	L	581	584	Right-handed 310
Helix 46	AF1	L	599	609	Right-handed alpha
Helix 47	AF2	L	637	645	Right-handed alpha
Helix 48	AF3	L	681	699	Right-handed alpha
Helix 49	AF4	M	38	43	Right-handed alpha
Helix 50	AF5	M	44	52	Right-handed alpha
Helix 51	AF6	M	54	61	Right-handed alpha
Helix 52	AF7	M	71	87	Right-handed alpha
Helix 53	AF8	M	88	91	Right-handed 310
Helix 54	AF9	M	104	113	Right-handed alpha
Helix 55	AG1	M	114	124	Right-handed alpha
Helix 56	AG2	M	140	150	Right-handed alpha
Helix 57	AG3	M	213	221	Right-handed alpha
Helix 58	AG4	M	243	255	Right-handed alpha
Helix 59	AG5	M	259	275	Right-handed alpha
Helix 60	AG6	M	284	289	Right-handed alpha
Helix 61	AG7	M	295	300	Right-handed alpha
Helix 62	AG8	M	318	328	Right-handed alpha
Helix 63	AG9	M	405	441	Right-handed alpha
Helix 64	AH1	M	449	465	Right-handed alpha
Helix 65	AH2	M	466	515	Right-handed alpha
Helix 66	AH3	M	525	631	Right-handed alpha
Helix 67	AH4	M	634	639	Right-handed alpha
Helix 68	AH5	N	20	34	Right-handed alpha
Helix 69	AH6	N	35	42	Right-handed alpha
Helix 70	AH7	N	69	86	Right-handed alpha
Helix 71	AH8	N	87	91	Right-handed 310
Helix 72	AH9	N	99	103	Right-handed 310
Helix 73	AI1	N	105	110	Right-handed alpha
Helix 74	AI2	N	113	128	Right-handed alpha
Helix 75	AI3	N	147	154	Right-handed alpha
Helix 76	AI4	N	155	159	Right-handed 310
Helix 77	AI5	N	221	228	Right-handed alpha
Helix 78	AI6	N	243	249	Right-handed alpha
Helix 79	AI7	N	272	280	Right-handed alpha
Helix 80	AI8	N	298	307	Right-handed alpha
Helix 81	AI9	N	326	341	Right-handed alpha
Helix 82	AJ1	N	354	362	Right-handed alpha
Helix 83	AJ2	N	415	437	Right-handed alpha
Helix 84	AJ3	N	439	511	Right-handed alpha
Helix 85	AJ4	N	517	523	Right-handed alpha
Helix 86	AJ5	N	524	595	Right-handed alpha
Helix 87	AJ6	A	44	55	Right-handed alpha
Helix 88	AJ7	A	63	77	Right-handed alpha
Helix 89	AJ8	A	85	114	Right-handed alpha
Helix 90	AJ9	A	120	132	Right-handed alpha
Helix 91	AK1	B	30	41	Right-handed alpha
Helix 92	AK2	B	50	76	Right-handed alpha
Helix 93	AK3	B	82	93	Right-handed alpha
Helix 94	AK4	C	26	37	Right-handed alpha
Helix 95	AK5	C	45	74	Right-handed alpha
Helix 96	AK6	C	79	90	Right-handed alpha
Helix 97	AK7	C	90	97	Right-handed alpha
Helix 98	AK8	D	34	46	Right-handed alpha
Helix 99	AK9	D	52	81	Right-handed alpha
Helix 100	AL1	D	87	99	Right-handed alpha
Helix 101	AL2	D	100	119	Right-handed alpha
Helix 102	AL3	E	44	55	Right-handed alpha
Helix 103	AL4	E	63	76	Right-handed alpha
Helix 104	AL5	E	85	114	Right-handed alpha
Helix 105	AL6	E	120	132	Right-handed alpha
Helix 106	AL7	F	30	41	Right-handed alpha
Helix 107	AL8	F	49	77	Right-handed alpha
Helix 108	AL9	F	82	91	Right-handed alpha
Helix 109	AM1	G	26	36	Right-handed alpha
Helix 110	AM2	G	46	73	Right-handed alpha
Helix 111	AM3	G	80	90	Right-handed alpha
Helix 112	AM4	G	92	97	Right-handed alpha
Helix 113	AM5	H	34	46	Right-handed alpha
Helix 114	AM6	H	52	82	Right-handed alpha
Helix 115	AM7	H	87	99	Right-handed alpha
Helix 116	AM8	H	100	120	Right-handed alpha

There are 13 sheets in PDB entry 6Z6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	118	120	first strand
Strand 2	K	58	61	parallel
Strand 3	K	196	198	parallel
Strand 4	K	370	377	parallel
Strand 5	K	330	337	parallel
Strand 6	K	239	243	parallel
Strand 7	K	262	268	parallel
Strand 8	K	296	300	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	476	477	first strand
Strand 2	K	490	492	anti-parallel
Strand 3	K	547	552	anti-parallel
Strand 4	K	502	507	parallel
Strand 5	K	591	595	parallel
Strand 6	K	618	623	parallel
Strand 7	K	646	650	parallel
Strand 8	K	672	674	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	511	516	first strand
Strand 2	K	523	531	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	58	61	first strand
Strand 2	L	118	121	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	296	301	first strand
Strand 2	L	262	269	parallel
Strand 3	L	239	243	parallel
Strand 4	L	330	336	parallel
Strand 5	L	370	376	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	476	477	first strand
Strand 2	L	491	492	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	547	548	first strand
Strand 2	L	501	508	parallel
Strand 3	L	551	553	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	547	548	first strand
Strand 2	L	501	508	parallel
Strand 3	L	588	595	parallel
Strand 4	L	619	623	parallel
Strand 5	L	648	650	parallel
Strand 6	L	672	674	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	31	35	first strand
Strand 2	M	236	240	parallel
Strand 3	M	203	204	parallel
Strand 4	M	135	136	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	11	13	first strand
Strand 2	N	288	290	parallel
Strand 3	N	261	263	parallel
Strand 4	N	142	145	parallel
Strand 5	N	237	242	parallel
Strand 6	N	164	167	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	102	first strand
Strand 2	F	97	98	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z6P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6P