Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z6W entry

There are 3 chains in PDB entry 6Z6W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	GLN 66	TYR 300
0	VAL 82	GLN 340
3	GLY 1	ALA 235

There are 13 helices in PDB entry 6Z6W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	74	79	Right-handed alpha
Helix 2	AA2	1	109	112	Right-handed 310
Helix 3	AA3	1	113	122	Right-handed alpha
Helix 4	AA4	1	170	175	Right-handed 310
Helix 5	AA5	0	104	106	Right-handed 310
Helix 6	AA6	0	152	157	Right-handed 310
Helix 7	AA7	0	158	167	Right-handed alpha
Helix 8	AA8	0	212	217	Right-handed alpha
Helix 9	AA9	0	256	261	Right-handed 310
Helix 10	AB1	3	43	48	Right-handed alpha
Helix 11	AB2	3	92	97	Right-handed alpha
Helix 12	AB3	3	98	105	Right-handed alpha
Helix 13	AB4	3	144	149	Right-handed alpha

There are 11 sheets in PDB entry 6Z6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	83	90	first strand
Strand 2	1	252	260	anti-parallel
Strand 3	1	123	140	anti-parallel
Strand 4	1	203	204	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	190	194	first strand
Strand 2	1	123	140	anti-parallel
Strand 3	1	263	270	anti-parallel
Strand 4	3	39	40	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	103	107	first strand
Strand 2	1	238	243	anti-parallel
Strand 3	1	152	158	anti-parallel
Strand 4	1	180	184	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	0	84	87	first strand
Strand 2	0	90	93	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	100	102	first strand
Strand 2	273	278	parallel
Strand 3	168	181	anti-parallel
Strand 4	315	331	anti-parallel
Strand 5	133	134	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	100	102	first strand
Strand 2	273	278	parallel
Strand 3	168	181	anti-parallel
Strand 4	315	331	anti-parallel
Strand 5	138	140	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	223	224	first strand
Strand 2	147	151	anti-parallel
Strand 3	295	307	anti-parallel
Strand 4	187	197	anti-parallel
Strand 5	263	267	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	51	52	first strand
Strand 2	3	207	216	anti-parallel
Strand 3	3	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	51	52	first strand
Strand 2	3	207	216	anti-parallel
Strand 3	3	114	120	anti-parallel
Strand 4	3	163	168	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	84	86	first strand
Strand 2	3	189	199	anti-parallel
Strand 3	3	127	135	anti-parallel
Strand 4	3	152	157	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	177	178	first strand
Strand 2	3	107	111	anti-parallel
Strand 3	3	221	225	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z6W

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6W