Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z72 entry

There are 4 chains in PDB entry 6Z72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 206LYS 379
B
 VAL 207LYS 379
C
 GLU 206LYS 379
D
 VAL 207GLU 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6Z72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
226 235Right-handed alpha
Helix 2
AA2
A
251 261Right-handed alpha
Helix 3
AA3
A
263 277Right-handed alpha
Helix 4
AA4
A
303 307Right-handed 310
Helix 5
AA5
A
311 319Right-handed alpha
Helix 6
AA6
A
320 323Right-handed 310
Helix 7
AA7
A
339 351Right-handed alpha
Helix 8
AA8
A
361 379Right-handed alpha
Helix 9
AA9
B
226 235Right-handed alpha
Helix 10
AB1
B
251 261Right-handed alpha
Helix 11
AB2
B
263 277Right-handed alpha
Helix 12
AB3
B
303 307Right-handed 310
Helix 13
AB4
B
311 319Right-handed alpha
Helix 14
AB5
B
320 323Right-handed 310
Helix 15
AB6
B
339 351Right-handed alpha
Helix 16
AB7
B
361 379Right-handed alpha
Helix 17
AB8
C
226 235Right-handed alpha
Helix 18
AB9
C
251 261Right-handed alpha
Helix 19
AC1
C
263 277Right-handed alpha
Helix 20
AC2
C
303 307Right-handed 310
Helix 21
AC3
C
311 319Right-handed alpha
Helix 22
AC4
C
320 323Right-handed 310
Helix 23
AC5
C
339 351Right-handed alpha
Helix 24
AC6
C
361 379Right-handed alpha
Helix 25
AC7
D
226 235Right-handed alpha
Helix 26
AC8
D
251 261Right-handed alpha
Helix 27
AC9
D
263 277Right-handed alpha
Helix 28
AD1
D
303 307Right-handed 310
Helix 29
AD2
D
311 319Right-handed alpha
Helix 30
AD3
D
320 323Right-handed 310
Helix 31
AD4
D
339 351Right-handed alpha
Helix 32
AD5
D
361 378Right-handed alpha
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There are 8 sheets in PDB entry 6Z72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
220 223anti-parallel
Strand 3
A
354 358parallel
Strand 4
A
325 328parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 242first strand
Strand 2
A
295 299parallel
Strand 3
A
284 288anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
220 224anti-parallel
Strand 3
B
354 359parallel
Strand 4
B
325 328parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 242first strand
Strand 2
B
295 299parallel
Strand 3
B
284 288anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
214 215first strand
Strand 2
C
220 224anti-parallel
Strand 3
C
354 359parallel
Strand 4
C
325 328parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 243first strand
Strand 2
C
295 300parallel
Strand 3
C
284 288anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
214 215first strand
Strand 2
D
220 223anti-parallel
Strand 3
D
354 358parallel
Strand 4
D
325 328parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
238 242first strand
Strand 2
D
295 299parallel
Strand 3
D
284 288anti-parallel
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