Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z7V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z7V entry

There are 9 chains in PDB entry 6Z7V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 240	SER 499
B	SER 241	SER 499
C	MET 1	GLY 76
D	MET 1	GLY 76
E	MET 1	LEU 73
F	MET 1	LEU 73
G	MET 1	LEU 73
H	MET 1	ARG 72
I	MET 1	ARG 74

There are 39 helices in PDB entry 6Z7V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	265	278	Right-handed alpha
Helix 2	AA2	A	292	306	Right-handed alpha
Helix 3	AA3	A	312	329	Right-handed alpha
Helix 4	AA4	A	330	335	Right-handed 310
Helix 5	AA5	A	352	354	Right-handed 310
Helix 6	AA6	A	355	362	Right-handed alpha
Helix 7	AA7	A	375	383	Right-handed alpha
Helix 8	AA8	A	386	398	Right-handed alpha
Helix 9	AA9	A	402	419	Right-handed alpha
Helix 10	AB1	A	424	435	Right-handed alpha
Helix 11	AB2	A	465	469	Right-handed 310
Helix 12	AB3	B	265	278	Right-handed alpha
Helix 13	AB4	B	292	306	Right-handed alpha
Helix 14	AB5	B	312	331	Right-handed alpha
Helix 15	AB6	B	332	335	Right-handed 310
Helix 16	AB7	B	352	354	Right-handed 310
Helix 17	AB8	B	355	362	Right-handed alpha
Helix 18	AB9	B	375	383	Right-handed alpha
Helix 19	AC1	B	386	398	Right-handed alpha
Helix 20	AC2	B	402	419	Right-handed alpha
Helix 21	AC3	B	424	435	Right-handed alpha
Helix 22	AC4	B	465	469	Right-handed 310
Helix 23	AC5	C	22	35	Right-handed alpha
Helix 24	AC6	C	37	39	Right-handed 310
Helix 25	AC7	C	55	60	Right-handed 310
Helix 26	AC8	D	22	35	Right-handed alpha
Helix 27	AC9	D	37	39	Right-handed 310
Helix 28	AD1	E	22	35	Right-handed alpha
Helix 29	AD2	E	37	39	Right-handed 310
Helix 30	AD3	F	22	34	Right-handed alpha
Helix 31	AD4	F	37	39	Right-handed 310
Helix 32	AD5	F	55	60	Right-handed 310
Helix 33	AD6	G	22	35	Right-handed alpha
Helix 34	AD7	G	37	39	Right-handed 310
Helix 35	AD8	H	22	34	Right-handed alpha
Helix 36	AD9	H	37	39	Right-handed 310
Helix 37	AE1	H	56	60	Right-handed 310
Helix 38	AE2	I	22	35	Right-handed alpha
Helix 39	AE3	I	37	39	Right-handed 310

There are 13 sheets in PDB entry 6Z7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	258	first strand
Strand 2	A	242	250	anti-parallel
Strand 3	A	289	291	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	339	first strand
Strand 2	D	73	75	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	367	first strand
Strand 2	A	441	444	parallel
Strand 3	A	449	455	anti-parallel
Strand 4	A	458	462	anti-parallel
Strand 5	A	476	478	anti-parallel
Strand 6	A	488	489	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	259	first strand
Strand 2	B	242	250	anti-parallel
Strand 3	B	289	291	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	339	first strand
Strand 2	C	73	75	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	367	first strand
Strand 2	B	441	444	parallel
Strand 3	B	449	455	anti-parallel
Strand 4	B	458	462	anti-parallel
Strand 5	B	476	478	anti-parallel
Strand 6	B	488	489	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	16	first strand
Strand 2	C	2	7	anti-parallel
Strand 3	C	66	71	parallel
Strand 4	C	41	45	anti-parallel
Strand 5	C	48	49	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	16	first strand
Strand 2	D	2	7	anti-parallel
Strand 3	D	66	71	parallel
Strand 4	D	41	45	anti-parallel
Strand 5	D	48	49	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	16	first strand
Strand 2	E	2	7	anti-parallel
Strand 3	E	66	71	parallel
Strand 4	E	41	45	anti-parallel
Strand 5	E	48	49	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	16	first strand
Strand 2	F	2	7	anti-parallel
Strand 3	F	66	71	parallel
Strand 4	F	41	45	anti-parallel
Strand 5	F	48	49	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	16	first strand
Strand 2	G	2	7	anti-parallel
Strand 3	G	66	71	parallel
Strand 4	G	41	45	anti-parallel
Strand 5	G	48	49	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	16	first strand
Strand 2	H	2	7	anti-parallel
Strand 3	H	66	71	parallel
Strand 4	H	41	45	anti-parallel
Strand 5	H	48	49	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	12	16	first strand
Strand 2	I	2	7	anti-parallel
Strand 3	I	65	71	parallel
Strand 4	I	41	45	anti-parallel
Strand 5	I	48	49	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z7V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z7V