Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z80

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z80 entry

There are 8 chains in PDB entry 6Z80 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 68	ARG 249
L	MET 1	LYS 83
B	LEU 68	ARG 249
C	LEU 68	ARG 249
E	LEU 68	ARG 249
G	LEU 68	ARG 249
H	LEU 68	ARG 249
I	LEU 68	LYS 160

There are130 helices in PDB entry 6Z80. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	68	75	Right-handed alpha
Helix 2	AA2	A	75	82	Right-handed alpha
Helix 3	AA3	A	88	92	Right-handed 310
Helix 4	AA4	A	93	103	Right-handed alpha
Helix 5	AA5	A	107	111	Right-handed 310
Helix 6	AA6	A	112	118	Right-handed alpha
Helix 7	AA7	A	164	177	Right-handed alpha
Helix 8	AA8	A	181	198	Right-handed alpha
Helix 9	AA9	A	211	215	Right-handed alpha
Helix 10	AB1	A	233	237	Right-handed alpha
Helix 11	AB2	A	237	248	Right-handed alpha
Helix 12	AB3	L	25	33	Right-handed alpha
Helix 13	AB4	L	52	64	Right-handed alpha
Helix 14	AB5	B	69	75	Right-handed alpha
Helix 15	AB6	B	75	82	Right-handed alpha
Helix 16	AB7	B	88	92	Right-handed 310
Helix 17	AB8	B	93	103	Right-handed alpha
Helix 18	AB9	B	107	111	Right-handed 310
Helix 19	AC1	B	112	118	Right-handed alpha
Helix 20	AC2	B	164	177	Right-handed alpha
Helix 21	AC3	B	181	198	Right-handed alpha
Helix 22	AC4	B	211	215	Right-handed alpha
Helix 23	AC5	B	233	237	Right-handed alpha
Helix 24	AC6	B	237	248	Right-handed alpha
Helix 25	AC7	C	69	75	Right-handed alpha
Helix 26	AC8	C	75	82	Right-handed alpha
Helix 27	AC9	C	88	92	Right-handed 310
Helix 28	AD1	C	93	103	Right-handed alpha
Helix 29	AD2	C	107	111	Right-handed 310
Helix 30	AD3	C	112	118	Right-handed alpha
Helix 31	AD4	C	164	177	Right-handed alpha
Helix 32	AD5	C	181	198	Right-handed alpha
Helix 33	AD6	C	211	215	Right-handed alpha
Helix 34	AD7	C	233	237	Right-handed alpha
Helix 35	AD8	C	237	248	Right-handed alpha
Helix 36	AD9	E	69	75	Right-handed alpha
Helix 37	AE1	E	75	82	Right-handed alpha
Helix 38	AE2	E	88	92	Right-handed 310
Helix 39	AE3	E	93	103	Right-handed alpha
Helix 40	AE4	E	107	111	Right-handed 310
Helix 41	AE5	E	112	118	Right-handed alpha
Helix 42	AE6	E	164	177	Right-handed alpha
Helix 43	AE7	E	181	198	Right-handed alpha
Helix 44	AE8	E	211	215	Right-handed alpha
Helix 45	AE9	E	233	237	Right-handed alpha
Helix 46	AF1	E	237	248	Right-handed alpha
Helix 47	AF2	G	69	75	Right-handed alpha
Helix 48	AF3	G	75	82	Right-handed alpha
Helix 49	AF4	G	88	92	Right-handed 310
Helix 50	AF5	G	93	103	Right-handed alpha
Helix 51	AF6	G	107	111	Right-handed 310
Helix 52	AF7	G	112	118	Right-handed alpha
Helix 53	AF8	G	164	177	Right-handed alpha
Helix 54	AF9	G	181	198	Right-handed alpha
Helix 55	AG1	G	211	215	Right-handed alpha
Helix 56	AG2	G	233	237	Right-handed alpha
Helix 57	AG3	G	237	248	Right-handed alpha
Helix 58	AG4	H	69	75	Right-handed alpha
Helix 59	AG5	H	75	82	Right-handed alpha
Helix 60	AG6	H	88	92	Right-handed 310
Helix 61	AG7	H	93	103	Right-handed alpha
Helix 62	AG8	H	107	111	Right-handed 310
Helix 63	AG9	H	112	118	Right-handed alpha
Helix 64	AH1	H	164	177	Right-handed alpha
Helix 65	AH2	H	181	198	Right-handed alpha
Helix 66	AH3	H	211	215	Right-handed alpha
Helix 67	AH4	H	233	237	Right-handed alpha
Helix 68	AH5	H	237	248	Right-handed alpha
Helix 69	AH6	I	69	75	Right-handed alpha
Helix 70	AH7	I	75	82	Right-handed alpha
Helix 71	AH8	I	88	92	Right-handed 310
Helix 72	AH9	I	93	103	Right-handed alpha
Helix 73	AI1	I	107	111	Right-handed 310
Helix 74	AI2	I	112	118	Right-handed alpha
Helix 75	AI3	I	164	177	Right-handed alpha
Helix 76	AI4	I	181	198	Right-handed alpha
Helix 77	AI5	I	211	215	Right-handed alpha
Helix 78	AI6	I	233	237	Right-handed alpha
Helix 79	AI7	I	237	248	Right-handed alpha
Helix 80	AI8	J	69	75	Right-handed alpha
Helix 81	AI9	J	75	82	Right-handed alpha
Helix 82	AJ1	J	88	92	Right-handed 310
Helix 83	AJ2	J	93	103	Right-handed alpha
Helix 84	AJ3	J	107	111	Right-handed 310
Helix 85	AJ4	J	112	118	Right-handed alpha
Helix 86	AJ5	J	164	177	Right-handed alpha
Helix 87	AJ6	J	181	198	Right-handed alpha
Helix 88	AJ7	J	211	215	Right-handed alpha
Helix 89	AJ8	J	233	237	Right-handed alpha
Helix 90	AJ9	J	237	248	Right-handed alpha
Helix 91	AK1	F	69	75	Right-handed alpha
Helix 92	AK2	F	75	82	Right-handed alpha
Helix 93	AK3	F	88	92	Right-handed 310
Helix 94	AK4	F	93	103	Right-handed alpha
Helix 95	AK5	F	107	111	Right-handed 310
Helix 96	AK6	F	112	118	Right-handed alpha
Helix 97	AK7	F	164	177	Right-handed alpha
Helix 98	AK8	F	181	198	Right-handed alpha
Helix 99	AK9	F	211	215	Right-handed alpha
Helix 100	AL1	F	233	237	Right-handed alpha
Helix 101	AL2	F	237	248	Right-handed alpha
Helix 102	AL3	D	69	75	Right-handed alpha
Helix 103	AL4	D	75	82	Right-handed alpha
Helix 104	AL5	D	88	92	Right-handed 310
Helix 105	AL6	D	93	103	Right-handed alpha
Helix 106	AL7	D	107	111	Right-handed 310
Helix 107	AL8	D	112	118	Right-handed alpha
Helix 108	AL9	D	164	177	Right-handed alpha
Helix 109	AM1	D	181	198	Right-handed alpha
Helix 110	AM2	D	211	215	Right-handed alpha
Helix 111	AM3	D	233	237	Right-handed alpha
Helix 112	AM4	D	237	248	Right-handed alpha
Helix 113	AM5	K	25	33	Right-handed alpha
Helix 114	AM6	K	52	64	Right-handed alpha
Helix 115	AM7	N	25	33	Right-handed alpha
Helix 116	AM8	N	52	64	Right-handed alpha
Helix 117	AM9	M	25	33	Right-handed alpha
Helix 118	AN1	M	52	64	Right-handed alpha
Helix 119	AN2	O	25	33	Right-handed alpha
Helix 120	AN3	O	52	64	Right-handed alpha
Helix 121	AN4	P	25	33	Right-handed alpha
Helix 122	AN5	P	52	64	Right-handed alpha
Helix 123	AN6	Q	25	33	Right-handed alpha
Helix 124	AN7	Q	52	64	Right-handed alpha
Helix 125	AN8	R	25	33	Right-handed alpha
Helix 126	AN9	R	52	64	Right-handed alpha
Helix 127	AO1	S	25	33	Right-handed alpha
Helix 128	AO2	S	52	64	Right-handed alpha
Helix 129	AO3	T	25	33	Right-handed alpha
Helix 130	AO4	T	52	64	Right-handed alpha

There are 50 sheets in PDB entry 6Z80. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	123	first strand
Strand 2	A	161	163	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	148	157	anti-parallel
Strand 3	A	201	210	anti-parallel
Strand 4	A	225	232	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	140	first strand
Strand 2	A	147	152	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	8	first strand
Strand 2	L	76	82	anti-parallel
Strand 3	L	66	73	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	37	first strand
Strand 2	L	46	49	anti-parallel
Strand 3	L	17	20	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	123	first strand
Strand 2	B	161	163	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	132	first strand
Strand 2	B	148	157	anti-parallel
Strand 3	B	201	210	anti-parallel
Strand 4	B	225	232	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	140	first strand
Strand 2	B	147	152	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	123	first strand
Strand 2	C	161	163	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	132	first strand
Strand 2	C	148	157	anti-parallel
Strand 3	C	201	210	anti-parallel
Strand 4	C	225	232	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	140	first strand
Strand 2	C	147	152	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	121	123	first strand
Strand 2	E	161	163	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	132	first strand
Strand 2	E	148	157	anti-parallel
Strand 3	E	201	210	anti-parallel
Strand 4	E	225	232	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	140	first strand
Strand 2	E	147	152	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	123	first strand
Strand 2	G	161	163	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	129	132	first strand
Strand 2	G	148	157	anti-parallel
Strand 3	G	201	210	anti-parallel
Strand 4	G	225	232	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	140	first strand
Strand 2	G	147	152	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	121	123	first strand
Strand 2	H	161	163	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	132	first strand
Strand 2	H	148	157	anti-parallel
Strand 3	H	201	210	anti-parallel
Strand 4	H	225	232	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	140	first strand
Strand 2	H	147	152	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	121	123	first strand
Strand 2	I	161	163	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	129	132	first strand
Strand 2	I	148	157	anti-parallel
Strand 3	I	201	210	anti-parallel
Strand 4	I	225	232	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	140	first strand
Strand 2	I	147	152	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	121	123	first strand
Strand 2	J	161	163	anti-parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	129	132	first strand
Strand 2	J	148	157	anti-parallel
Strand 3	J	201	210	anti-parallel
Strand 4	J	225	232	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	135	140	first strand
Strand 2	J	147	152	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	121	123	first strand
Strand 2	F	161	163	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	129	132	first strand
Strand 2	F	148	157	anti-parallel
Strand 3	F	201	210	anti-parallel
Strand 4	F	225	232	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	140	first strand
Strand 2	F	147	152	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	123	first strand
Strand 2	D	161	163	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	132	first strand
Strand 2	D	148	157	anti-parallel
Strand 3	D	201	210	anti-parallel
Strand 4	D	225	232	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	140	first strand
Strand 2	D	147	152	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	3	8	first strand
Strand 2	K	76	82	anti-parallel
Strand 3	K	66	73	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	37	first strand
Strand 2	K	46	49	anti-parallel
Strand 3	K	17	20	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	8	first strand
Strand 2	N	76	82	anti-parallel
Strand 3	N	66	73	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	35	37	first strand
Strand 2	N	46	49	anti-parallel
Strand 3	N	17	20	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	3	8	first strand
Strand 2	M	76	82	anti-parallel
Strand 3	M	66	73	anti-parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	35	37	first strand
Strand 2	M	46	49	anti-parallel
Strand 3	M	17	20	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	3	8	first strand
Strand 2	O	76	82	anti-parallel
Strand 3	O	66	73	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	35	37	first strand
Strand 2	O	46	49	anti-parallel
Strand 3	O	17	20	anti-parallel

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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	3	8	first strand
Strand 2	P	76	82	anti-parallel
Strand 3	P	66	73	anti-parallel

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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	35	37	first strand
Strand 2	P	46	49	anti-parallel
Strand 3	P	17	20	anti-parallel

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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	3	8	first strand
Strand 2	Q	76	82	anti-parallel
Strand 3	Q	66	73	anti-parallel

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There are 3 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	35	37	first strand
Strand 2	Q	46	49	anti-parallel
Strand 3	Q	17	20	anti-parallel

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There are 3 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	3	8	first strand
Strand 2	R	76	82	anti-parallel
Strand 3	R	66	73	anti-parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	35	37	first strand
Strand 2	R	46	49	anti-parallel
Strand 3	R	17	20	anti-parallel

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There are 3 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3	8	first strand
Strand 2	S	76	82	anti-parallel
Strand 3	S	66	73	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	35	37	first strand
Strand 2	S	46	49	anti-parallel
Strand 3	S	17	20	anti-parallel

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There are 3 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	3	8	first strand
Strand 2	T	76	82	anti-parallel
Strand 3	T	66	73	anti-parallel

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There are 3 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	35	37	first strand
Strand 2	T	46	49	anti-parallel
Strand 3	T	17	20	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z80

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z80