Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z89


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z89 entry

There are 5 chains in PDB entry 6Z89 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 58ILE 248
B
 SER 60ARG 249
C
 ALA 120ARG 249
D
 PRO 58ARG 249
E
 PRO 58ARG 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6Z89. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 81Right-handed alpha
Helix 2
2
A
94 105Right-handed alpha
Helix 3
3
A
107 110Right-handed 310
Helix 4
4
A
113 116Right-handed alpha
Helix 5
5
A
165 176Right-handed alpha
Helix 6
6
A
182 197Right-handed alpha
Helix 7
7
A
232 236Right-handed 310
Helix 8
8
A
238 247Right-handed alpha
Helix 9
9
B
61 81Right-handed alpha
Helix 10
10
B
94 109Right-handed alpha
Helix 11
11
B
165 176Right-handed alpha
Helix 12
12
B
182 197Right-handed alpha
Helix 13
13
B
232 236Right-handed 310
Helix 14
14
B
238 247Right-handed alpha
Helix 15
15
C
165 176Right-handed alpha
Helix 16
16
C
182 197Right-handed alpha
Helix 17
17
C
232 236Right-handed 310
Helix 18
18
C
238 247Right-handed alpha
Helix 19
19
D
61 81Right-handed alpha
Helix 20
20
D
94 105Right-handed alpha
Helix 21
21
D
107 110Right-handed 310
Helix 22
22
D
113 116Right-handed alpha
Helix 23
23
D
165 176Right-handed alpha
Helix 24
24
D
182 197Right-handed alpha
Helix 25
25
D
232 236Right-handed 310
Helix 26
26
D
238 247Right-handed alpha
Helix 27
27
E
61 81Right-handed alpha
Helix 28
28
E
89 92Right-handed alpha
Helix 29
29
E
94 105Right-handed alpha
Helix 30
30
E
107 109Right-handed 310
Helix 31
31
E
165 176Right-handed alpha
Helix 32
32
E
182 197Right-handed alpha
Helix 33
33
E
232 236Right-handed 310
Helix 34
34
E
238 246Right-handed alpha
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There are 13 sheets in PDB entry 6Z89. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
161 163anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
149 157anti-parallel
Strand 3
A
201 209anti-parallel
Strand 4
A
225 232anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 140first strand
Strand 2
A
147 152anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
148 157anti-parallel
Strand 3
B
201 210anti-parallel
Strand 4
B
224 232anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 140first strand
Strand 2
B
147 152anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 123first strand
Strand 2
C
161 163anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 132first strand
Strand 2
C
148 157anti-parallel
Strand 3
C
201 210anti-parallel
Strand 4
C
225 232anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 141first strand
Strand 2
C
146 152anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
121 123first strand
Strand 2
D
161 163anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
129 132first strand
Strand 2
D
149 157anti-parallel
Strand 3
D
201 209anti-parallel
Strand 4
D
225 232anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
135 140first strand
Strand 2
D
147 152anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
130 132first strand
Strand 2
E
148 156anti-parallel
Strand 3
E
201 210anti-parallel
Strand 4
E
224 232anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
135 140first strand
Strand 2
E
147 152anti-parallel
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