Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z92 entry

There are 2 chains in PDB entry 6Z92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3VAL 152
B
 LYS 2VAL 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6Z92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 13Right-handed 310
Helix 2
AA2
A
27 36Right-handed alpha
Helix 3
AA3
A
43 48Right-handed alpha
Helix 4
AA4
A
72 91Right-handed alpha
Helix 5
AA5
A
123 132Right-handed alpha
Helix 6
AA6
A
138 140Right-handed 310
Helix 7
AA7
A
141 152Right-handed alpha
Helix 8
AA8
B
10 13Right-handed 310
Helix 9
AA9
B
27 36Right-handed alpha
Helix 10
AB1
B
43 48Right-handed alpha
Helix 11
AB2
B
72 91Right-handed alpha
Helix 12
AB3
B
123 132Right-handed alpha
Helix 13
AB4
B
138 140Right-handed 310
Helix 14
AB5
B
141 152Right-handed alpha
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There are 6 sheets in PDB entry 6Z92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
5 8parallel
Strand 3
A
94 96parallel
Strand 4
A
135 137parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
63 66anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
118 120anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
B
5 8parallel
Strand 3
B
94 96parallel
Strand 4
B
135 137parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
63 66anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 110first strand
Strand 2
B
118 120anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il