Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z9C entry

There is 1 chain in PDB entry 6Z9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 49ASP 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6Z9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
195 200Right-handed alpha
Helix 2
AA2
A
215 228Right-handed alpha
Helix 3
AA3
A
229 231Right-handed 310
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There are 5 sheets in PDB entry 6Z9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
314 323anti-parallel
Strand 3
A
261 271anti-parallel
Strand 4
A
241 252anti-parallel
Strand 5
A
233 238anti-parallel
Strand 6
A
91 104parallel
Strand 7
A
82 85anti-parallel
Strand 8
A
181 185anti-parallel
Strand 9
A
67 68anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
314 323anti-parallel
Strand 3
A
261 271anti-parallel
Strand 4
A
241 252anti-parallel
Strand 5
A
233 238anti-parallel
Strand 6
A
91 104parallel
Strand 7
A
129 138anti-parallel
Strand 8
A
173 177anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 203first strand
Strand 2
A
211 213anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 299first strand
Strand 2
A
277 288anti-parallel
Strand 3
A
307 308anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 299first strand
Strand 2
A
277 288anti-parallel
Strand 3
A
328 337anti-parallel
Strand 4
A
343 353anti-parallel
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