Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZAZ entry

There are 2 chains in PDB entry 6ZAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 1	ALA 555
B	ASP 96	VAL 805

There are 47 helices in PDB entry 6ZAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	6	Right-handed 310
Helix 2	AA2	A	17	23	Right-handed 310
Helix 3	AA3	A	24	39	Right-handed alpha
Helix 4	AA4	A	48	53	Right-handed alpha
Helix 5	AA5	A	68	77	Right-handed alpha
Helix 6	AA6	A	84	110	Right-handed alpha
Helix 7	AA7	A	118	142	Right-handed alpha
Helix 8	AA8	A	154	160	Right-handed 310
Helix 9	AA9	A	166	185	Right-handed alpha
Helix 10	AB1	A	196	213	Right-handed alpha
Helix 11	AB2	A	226	236	Right-handed alpha
Helix 12	AB3	A	238	244	Right-handed alpha
Helix 13	AB4	A	252	262	Right-handed 310
Helix 14	AB5	A	285	289	Right-handed 310
Helix 15	AB6	A	293	297	Right-handed 310
Helix 16	AB7	A	305	312	Right-handed alpha
Helix 17	AB8	A	324	328	Right-handed 310
Helix 18	AB9	A	340	344	Right-handed alpha
Helix 19	AC1	A	407	421	Right-handed alpha
Helix 20	AC2	A	425	442	Right-handed alpha
Helix 21	AC3	A	449	454	Right-handed alpha
Helix 22	AC4	A	469	485	Right-handed alpha
Helix 23	AC5	A	490	498	Right-handed alpha
Helix 24	AC6	A	500	514	Right-handed alpha
Helix 25	AC7	A	516	522	Right-handed 310
Helix 26	AC8	A	535	543	Right-handed alpha
Helix 27	AC9	B	105	110	Right-handed alpha
Helix 28	AD1	B	111	113	Right-handed 310
Helix 29	AD2	B	117	122	Right-handed 310
Helix 30	AD3	B	172	174	Right-handed 310
Helix 31	AD4	B	184	190	Right-handed alpha
Helix 32	AD5	B	233	248	Right-handed alpha
Helix 33	AD6	B	251	255	Right-handed 310
Helix 34	AD7	B	294	300	Right-handed alpha
Helix 35	AD8	B	376	384	Right-handed alpha
Helix 36	AD9	B	409	417	Right-handed alpha
Helix 37	AE1	B	535	539	Right-handed 310
Helix 38	AE2	B	584	588	Right-handed 310
Helix 39	AE3	B	602	608	Right-handed 310
Helix 40	AE4	B	725	729	Right-handed 310
Helix 41	AE5	B	779	786	Right-handed alpha
Helix 42	AE6	B	815	821	Right-handed alpha
Helix 43	AE7	B	890	895	Right-handed alpha
Helix 44	AE8	B	909	914	Right-handed 310
Helix 45	AE9	B	939	941	Right-handed 310
Helix 46	AF1	B	961	966	Right-handed alpha
Helix 47	AF2	B	967	969	Right-handed 310

There are 17 sheets in PDB entry 6ZAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	15	first strand
Strand 2	B	638	640	anti-parallel
Strand 3	B	674	677	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	301	304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	402	406	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	336	337	anti-parallel
Strand 3	A	457	458	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	346	first strand
Strand 2	A	377	378	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	352	first strand
Strand 2	A	355	359	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	396	398	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	104	first strand
Strand 2	B	176	182	anti-parallel
Strand 3	B	199	204	anti-parallel
Strand 4	B	156	159	parallel
Strand 5	B	162	164	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	141	144	anti-parallel

Back to list of sheets
Back to top of page

There are 23 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	224	first strand
Strand 2	B	303	315	anti-parallel
Strand 3	B	319	331	anti-parallel
Strand 4	B	338	352	anti-parallel
Strand 5	B	357	371	anti-parallel
Strand 6	B	421	438	anti-parallel
Strand 7	B	441	460	anti-parallel
Strand 8	B	475	498	anti-parallel
Strand 9	B	501	524	anti-parallel
Strand 10	B	543	565	anti-parallel
Strand 11	B	569	580	anti-parallel
Strand 12	B	591	600	anti-parallel
Strand 13	B	613	627	anti-parallel
Strand 14	B	686	699	anti-parallel
Strand 15	B	704	716	anti-parallel
Strand 16	B	740	754	anti-parallel
Strand 17	B	760	777	anti-parallel
Strand 18	B	859	869	anti-parallel
Strand 19	B	872	882	anti-parallel
Strand 20	B	948	959	anti-parallel
Strand 21	B	972	986	anti-parallel
Strand 22	B	1006	1016	anti-parallel
Strand 23	B	212	224	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	265	first strand
Strand 2	B	271	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	465	first strand
Strand 2	B	468	469	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	722	first strand
Strand 2	B	734	737	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	807	first strand
Strand 2	B	849	853	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	809	812	first strand
Strand 2	B	833	835	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	824	825	first strand
Strand 2	B	843	844	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	885	887	first strand
Strand 2	B	943	945	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZAZ