Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZB4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZB4 entry

There are 3 chains in PDB entry 6ZB4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	CYS 15	ASP 1136
B	CYS 15	ASP 1136
A	CYS 15	ASP 1136

There are 61 helices in PDB entry 6ZB4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	294	304	Right-handed alpha
Helix 2	AA2	C	337	343	Right-handed alpha
Helix 3	AA3	C	349	353	Right-handed 310
Helix 4	AA4	C	364	371	Right-handed 310
Helix 5	AA5	C	383	387	Right-handed 310
Helix 6	AA6	C	405	410	Right-handed 310
Helix 7	AA7	C	416	421	Right-handed alpha
Helix 8	AA8	C	734	740	Right-handed alpha
Helix 9	AA9	C	744	751	Right-handed alpha
Helix 10	AB1	C	756	780	Right-handed alpha
Helix 11	AB2	C	813	821	Right-handed alpha
Helix 12	AB3	C	833	838	Right-handed alpha
Helix 13	AB4	C	863	882	Right-handed alpha
Helix 14	AB5	C	883	887	Right-handed 310
Helix 15	AB6	C	894	906	Right-handed alpha
Helix 16	AB7	C	910	916	Right-handed alpha
Helix 17	AB8	C	916	936	Right-handed alpha
Helix 18	AB9	C	942	962	Right-handed alpha
Helix 19	AC1	C	963	965	Right-handed 310
Helix 20	AC2	C	973	978	Right-handed alpha
Helix 21	AC3	C	986	1029	Right-handed alpha
Helix 22	AC4	B	294	303	Right-handed alpha
Helix 23	AC5	B	338	343	Right-handed alpha
Helix 24	AC6	B	349	353	Right-handed 310
Helix 25	AC7	B	364	368	Right-handed 310
Helix 26	AC8	B	383	387	Right-handed 310
Helix 27	AC9	B	405	410	Right-handed 310
Helix 28	AD1	B	416	422	Right-handed alpha
Helix 29	AD2	B	734	740	Right-handed alpha
Helix 30	AD3	B	743	750	Right-handed alpha
Helix 31	AD4	B	751	753	Right-handed 310
Helix 32	AD5	B	756	780	Right-handed alpha
Helix 33	AD6	B	813	821	Right-handed alpha
Helix 34	AD7	B	847	852	Right-handed alpha
Helix 35	AD8	B	863	882	Right-handed alpha
Helix 36	AD9	B	883	887	Right-handed 310
Helix 37	AE1	B	894	905	Right-handed alpha
Helix 38	AE2	B	910	915	Right-handed alpha
Helix 39	AE3	B	916	936	Right-handed alpha
Helix 40	AE4	B	942	962	Right-handed alpha
Helix 41	AE5	B	963	965	Right-handed 310
Helix 42	AE6	B	973	981	Right-handed alpha
Helix 43	AE7	B	982	1029	Right-handed alpha
Helix 44	AE8	A	294	304	Right-handed alpha
Helix 45	AE9	A	337	343	Right-handed alpha
Helix 46	AF1	A	364	370	Right-handed 310
Helix 47	AF2	A	383	387	Right-handed 310
Helix 48	AF3	A	405	410	Right-handed 310
Helix 49	AF4	A	416	421	Right-handed alpha
Helix 50	AF5	A	734	740	Right-handed alpha
Helix 51	AF6	A	744	751	Right-handed alpha
Helix 52	AF7	A	756	780	Right-handed alpha
Helix 53	AF8	A	813	821	Right-handed alpha
Helix 54	AF9	A	833	838	Right-handed alpha
Helix 55	AG1	A	863	881	Right-handed alpha
Helix 56	AG2	A	894	905	Right-handed alpha
Helix 57	AG3	A	910	915	Right-handed alpha
Helix 58	AG4	A	916	937	Right-handed alpha
Helix 59	AG5	A	942	962	Right-handed alpha
Helix 60	AG6	A	973	981	Right-handed alpha
Helix 61	AG7	A	982	1030	Right-handed alpha

There are 50 sheets in PDB entry 6ZB4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	60	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	191	197	anti-parallel
Strand 6	C	200	206	anti-parallel
Strand 7	C	222	229	anti-parallel
Strand 8	C	36	37	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	244	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	117	119	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	244	anti-parallel
Strand 3	C	135	142	parallel
Strand 4	C	157	160	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	314	first strand
Strand 2	C	595	599	anti-parallel
Strand 3	C	609	612	anti-parallel
Strand 4	C	649	651	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	328	first strand
Strand 2	C	539	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	573	577	anti-parallel
Strand 6	C	565	567	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	403	anti-parallel
Strand 3	C	507	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	376	379	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	392	first strand
Strand 2	C	524	525	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	689	693	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	708	710	first strand
Strand 2	C	1071	1074	anti-parallel
Strand 3	C	1091	1094	anti-parallel
Strand 4	C	1099	1102	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	725	first strand
Strand 2	C	1056	1066	anti-parallel
Strand 3	C	1044	1053	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	733	first strand
Strand 2	C	855	857	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1083	1086	first strand
Strand 2	C	1118	1122	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	29	first strand
Strand 2	B	62	64	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	244	anti-parallel
Strand 3	B	135	142	parallel
Strand 4	B	158	160	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	244	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	127	131	anti-parallel
Strand 6	B	168	169	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	230	first strand
Strand 2	B	200	206	anti-parallel
Strand 3	B	191	197	anti-parallel
Strand 4	B	90	94	anti-parallel
Strand 5	B	265	269	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	314	first strand
Strand 2	B	595	599	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	649	651	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	395	403	anti-parallel
Strand 3	B	507	514	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	376	379	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	392	first strand
Strand 2	B	524	525	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	543	first strand
Strand 2	B	546	554	anti-parallel
Strand 3	B	584	588	anti-parallel
Strand 4	B	575	577	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	688	693	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	709	710	first strand
Strand 2	B	1071	1072	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	725	first strand
Strand 2	B	1056	1066	anti-parallel
Strand 3	B	1044	1053	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	733	first strand
Strand 2	B	855	857	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	786	787	first strand
Strand 2	A	700	701	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1118	1122	first strand
Strand 2	B	1083	1086	anti-parallel
Strand 3	B	1078	1079	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1091	1094	first strand
Strand 2	B	1099	1103	anti-parallel
Strand 3	B	1106	1110	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	60	62	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	287	anti-parallel

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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	66	first strand
Strand 2	A	264	267	anti-parallel
Strand 3	A	90	95	anti-parallel
Strand 4	A	191	197	anti-parallel
Strand 5	A	200	206	anti-parallel
Strand 6	A	224	229	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	245	anti-parallel
Strand 3	A	133	143	parallel
Strand 4	A	157	163	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	245	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	120	anti-parallel
Strand 5	A	127	131	anti-parallel
Strand 6	A	168	169	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	314	first strand
Strand 2	A	595	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	649	651	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	575	577	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	395	403	anti-parallel
Strand 3	A	507	514	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	524	525	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	690	693	parallel
Strand 3	A	670	673	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	712	first strand
Strand 2	A	1069	1073	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	725	first strand
Strand 2	A	1056	1066	anti-parallel
Strand 3	A	1044	1053	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	733	first strand
Strand 2	A	855	857	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1078	1079	first strand
Strand 2	A	1083	1086	anti-parallel
Strand 3	A	1118	1122	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1091	1094	first strand
Strand 2	A	1099	1102	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZB4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZB4