Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZBO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZBO entry

There are 4 chains in PDB entry 6ZBO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 188	GLU 407
B	GLY 183	GLU 407
C	PRO 189	THR 405
D	LEU 188	GLU 217

There are 36 helices in PDB entry 6ZBO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	189	197	Right-handed alpha
Helix 2	AA2	A	197	206	Right-handed alpha
Helix 3	AA3	A	215	231	Right-handed alpha
Helix 4	AA4	A	266	283	Right-handed alpha
Helix 5	AA5	A	335	340	Right-handed alpha
Helix 6	AA6	A	393	401	Right-handed alpha
Helix 7	AA7	B	189	197	Right-handed alpha
Helix 8	AA8	B	197	206	Right-handed alpha
Helix 9	AA9	B	215	231	Right-handed alpha
Helix 10	AB1	B	266	282	Right-handed alpha
Helix 11	AB2	B	335	340	Right-handed alpha
Helix 12	AB3	B	393	401	Right-handed alpha
Helix 13	AB4	C	190	197	Right-handed alpha
Helix 14	AB5	C	197	206	Right-handed alpha
Helix 15	AB6	C	215	230	Right-handed alpha
Helix 16	AB7	C	266	283	Right-handed alpha
Helix 17	AB8	C	335	340	Right-handed alpha
Helix 18	AB9	C	393	401	Right-handed alpha
Helix 19	AC1	D	189	197	Right-handed alpha
Helix 20	AC2	D	197	206	Right-handed alpha
Helix 21	AC3	D	215	231	Right-handed alpha
Helix 22	AC4	D	266	284	Right-handed alpha
Helix 23	AC5	D	335	340	Right-handed alpha
Helix 24	AC6	D	393	401	Right-handed alpha
Helix 25	AC7	E	190	197	Right-handed alpha
Helix 26	AC8	E	197	206	Right-handed alpha
Helix 27	AC9	E	215	232	Right-handed alpha
Helix 28	AD1	E	266	284	Right-handed alpha
Helix 29	AD2	E	335	340	Right-handed alpha
Helix 30	AD3	E	393	401	Right-handed alpha
Helix 31	AD4	F	190	197	Right-handed alpha
Helix 32	AD5	F	197	206	Right-handed alpha
Helix 33	AD6	F	215	230	Right-handed alpha
Helix 34	AD7	F	266	283	Right-handed alpha
Helix 35	AD8	F	335	340	Right-handed alpha
Helix 36	AD9	F	393	401	Right-handed alpha

There are 14 sheets in PDB entry 6ZBO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	210	first strand
Strand 2	A	362	367	anti-parallel
Strand 3	A	322	329	anti-parallel
Strand 4	A	383	392	anti-parallel
Strand 5	A	298	303	anti-parallel
Strand 6	A	255	259	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	210	first strand
Strand 2	A	362	367	anti-parallel
Strand 3	A	322	329	anti-parallel
Strand 4	A	383	392	anti-parallel
Strand 5	A	292	295	anti-parallel

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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	313	first strand
Strand 2	A	374	376	anti-parallel
Strand 3	A	343	345	anti-parallel
Strand 4	A	352	356	anti-parallel
Strand 5	F	308	313	anti-parallel
Strand 6	F	374	376	anti-parallel
Strand 7	F	343	345	anti-parallel
Strand 8	F	352	356	anti-parallel
Strand 9	B	308	313	anti-parallel
Strand 10	B	374	376	anti-parallel
Strand 11	B	343	345	anti-parallel
Strand 12	B	352	356	anti-parallel
Strand 13	A	308	313	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	210	first strand
Strand 2	B	362	367	anti-parallel
Strand 3	B	322	329	anti-parallel
Strand 4	B	383	392	anti-parallel
Strand 5	B	298	303	anti-parallel
Strand 6	B	255	259	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	210	first strand
Strand 2	B	362	367	anti-parallel
Strand 3	B	322	329	anti-parallel
Strand 4	B	383	392	anti-parallel
Strand 5	B	292	295	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	210	first strand
Strand 2	C	363	367	anti-parallel
Strand 3	C	322	329	anti-parallel
Strand 4	C	383	392	anti-parallel
Strand 5	C	298	303	anti-parallel
Strand 6	C	255	259	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	210	first strand
Strand 2	C	363	367	anti-parallel
Strand 3	C	322	329	anti-parallel
Strand 4	C	383	392	anti-parallel
Strand 5	C	292	295	anti-parallel

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There are 13 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	313	first strand
Strand 2	C	374	376	anti-parallel
Strand 3	C	343	345	anti-parallel
Strand 4	C	352	356	anti-parallel
Strand 5	E	308	313	anti-parallel
Strand 6	E	374	376	anti-parallel
Strand 7	E	343	345	anti-parallel
Strand 8	E	352	356	anti-parallel
Strand 9	D	308	313	anti-parallel
Strand 10	D	374	376	anti-parallel
Strand 11	D	343	345	anti-parallel
Strand 12	D	352	356	anti-parallel
Strand 13	C	308	313	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	210	first strand
Strand 2	D	362	367	anti-parallel
Strand 3	D	322	329	anti-parallel
Strand 4	D	383	392	anti-parallel
Strand 5	D	298	303	anti-parallel
Strand 6	D	255	259	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	210	first strand
Strand 2	D	362	367	anti-parallel
Strand 3	D	322	329	anti-parallel
Strand 4	D	383	392	anti-parallel
Strand 5	D	292	295	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	210	first strand
Strand 2	E	362	367	anti-parallel
Strand 3	E	322	329	anti-parallel
Strand 4	E	383	392	anti-parallel
Strand 5	E	298	303	anti-parallel
Strand 6	E	255	259	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	210	first strand
Strand 2	E	362	367	anti-parallel
Strand 3	E	322	329	anti-parallel
Strand 4	E	383	392	anti-parallel
Strand 5	E	292	295	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	210	first strand
Strand 2	F	362	367	anti-parallel
Strand 3	F	322	329	anti-parallel
Strand 4	F	383	392	anti-parallel
Strand 5	F	298	303	anti-parallel
Strand 6	F	255	259	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	210	first strand
Strand 2	F	362	367	anti-parallel
Strand 3	F	322	329	anti-parallel
Strand 4	F	383	392	anti-parallel
Strand 5	F	292	295	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZBO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZBO