Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZBV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZBV entry

There are 2 chains in PDB entry 6ZBV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 100GLY 664
B
 GLN 1SER 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6ZBV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 118Right-handed alpha
Helix 2
AA2
A
119 124Right-handed alpha
Helix 3
AA3
A
124 134Right-handed alpha
Helix 4
AA4
A
134 149Right-handed alpha
Helix 5
AA5
A
149 165Right-handed alpha
Helix 6
AA6
A
175 177Right-handed 310
Helix 7
AA7
A
178 210Right-handed alpha
Helix 8
AA8
A
215 219Right-handed 310
Helix 9
AA9
A
263 272Right-handed alpha
Helix 10
AB1
A
287 308Right-handed alpha
Helix 11
AB2
A
316 337Right-handed alpha
Helix 12
AB3
A
339 349Right-handed alpha
Helix 13
AB4
A
357 371Right-handed alpha
Helix 14
AB5
A
377 384Right-handed alpha
Helix 15
AB6
A
391 426Right-handed alpha
Helix 16
AB7
A
428 432Right-handed 310
Helix 17
AB8
A
438 449Right-handed alpha
Helix 18
AB9
A
453 487Right-handed alpha
Helix 19
AC1
A
489 496Right-handed alpha
Helix 20
AC2
A
496 511Right-handed alpha
Helix 21
AC3
A
512 517Right-handed 310
Helix 22
AC4
A
519 530Right-handed alpha
Helix 23
AC5
A
534 550Right-handed alpha
Helix 24
AC6
A
552 565Right-handed alpha
Helix 25
AC7
A
569 578Right-handed alpha
Helix 26
AC8
A
578 595Right-handed alpha
Helix 27
AC9
A
606 620Right-handed alpha
Helix 28
AD1
A
622 635Right-handed alpha
Helix 29
AD2
A
641 649Right-handed alpha
Helix 30
AD3
B
28 32Right-handed 310
Helix 31
AD4
B
87 91Right-handed 310
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There are 4 sheets in PDB entry 6ZBV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 600first strand
Strand 2
A
603 604anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
115 120parallel
Strand 3
B
92 100anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
115 120parallel
Strand 3
B
92 100anti-parallel
Strand 4
B
108 111anti-parallel
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