Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZCW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZCW entry

There is 1 chain in PDB entry 6ZCW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 28GLN 589
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6ZCW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 37Right-handed alpha
Helix 2
AA2
A
66 70Right-handed 310
Helix 3
AA3
A
173 177Right-handed 310
Helix 4
AA4
A
197 201Right-handed 310
Helix 5
AA5
A
253 258Right-handed 310
Helix 6
AA6
A
286 290Right-handed 310
Helix 7
AA7
A
390 393Right-handed 310
Helix 8
AA8
A
557 562Right-handed alpha
Helix 9
AA9
A
562 569Right-handed alpha
Helix 10
AB1
A
584 588Right-handed 310
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There are 10 sheets in PDB entry 6ZCW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
496 499parallel
Strand 3
A
503 507anti-parallel
Strand 4
A
512 517anti-parallel
Strand 5
A
523 528anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 77first strand
Strand 2
A
577 582anti-parallel
Strand 3
A
545 552anti-parallel
Strand 4
A
538 542anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 93first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
105 110anti-parallel
Strand 4
A
116 121anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
145 149anti-parallel
Strand 3
A
154 159anti-parallel
Strand 4
A
165 170anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
190 193anti-parallel
Strand 3
A
205 209anti-parallel
Strand 4
A
216 221anti-parallel
Strand 5
A
227 232anti-parallel
Strand 6
A
235 241anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
274 278anti-parallel
Strand 3
A
299 303anti-parallel
Strand 4
A
310 315anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 336first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
353 358anti-parallel
Strand 4
A
364 369anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
386 388anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 408first strand
Strand 2
A
437 443anti-parallel
Strand 3
A
457 463anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 424first strand
Strand 2
A
429 435anti-parallel
Strand 3
A
470 476anti-parallel
Strand 4
A
481 488anti-parallel
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