Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZD1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZD1 entry

There is 1 chain in PDB entry 6ZD1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 178ASP 881
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6ZD1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 191Right-handed alpha
Helix 2
AA2
A
211 227Right-handed alpha
Helix 3
AA3
A
228 237Right-handed alpha
Helix 4
AA4
A
247 252Right-handed 310
Helix 5
AA5
A
254 270Right-handed alpha
Helix 6
AA6
A
271 276Right-handed 310
Helix 7
AA7
A
279 294Right-handed alpha
Helix 8
AA8
A
301 306Right-handed alpha
Helix 9
AA9
A
330 332Right-handed 310
Helix 10
AB1
A
333 346Right-handed alpha
Helix 11
AB2
A
346 355Right-handed alpha
Helix 12
AB3
A
374 392Right-handed alpha
Helix 13
AB4
A
429 435Right-handed alpha
Helix 14
AB5
A
438 456Right-handed alpha
Helix 15
AB6
A
456 475Right-handed alpha
Helix 16
AB7
A
484 503Right-handed alpha
Helix 17
AB8
A
518 523Right-handed alpha
Helix 18
AB9
A
524 536Right-handed alpha
Helix 19
AC1
A
604 617Right-handed alpha
Helix 20
AC2
A
644 661Right-handed alpha
Helix 21
AC3
A
686 697Right-handed alpha
Helix 22
AC4
A
702 706Right-handed 310
Helix 23
AC5
A
710 714Right-handed 310
Helix 24
AC6
A
757 773Right-handed alpha
Helix 25
AC7
A
774 778Right-handed 310
Helix 26
AC8
A
784 814Right-handed alpha
Helix 27
AC9
A
817 841Right-handed alpha
Helix 28
AD1
A
845 861Right-handed alpha
Helix 29
AD2
A
867 876Right-handed alpha
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There are 6 sheets in PDB entry 6ZD1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 360first strand
Strand 2
A
369 373anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 396first strand
Strand 2
A
630 634anti-parallel
Strand 3
A
619 622anti-parallel
Strand 4
A
407 413parallel
Strand 5
A
420 425anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 676first strand
Strand 2
A
679 684anti-parallel
Strand 3
A
510 515anti-parallel
Strand 4
A
715 717anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 548first strand
Strand 2
A
599 603anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 566first strand
Strand 2
A
878 879anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 729first strand
Strand 2
A
732 735anti-parallel
Strand 3
A
741 743anti-parallel
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