Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZDC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZDC entry

There is 1 chain in PDB entry 6ZDC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 94ALA 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6ZDC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
113 118Right-handed alpha
Helix 2
AA2
A
165 179Right-handed alpha
Helix 3
AA3
A
200 203Right-handed 310
Helix 4
AA4
A
204 215Right-handed alpha
Helix 5
AA5
A
230 246Right-handed alpha
Helix 6
AA6
A
269 273Right-handed 310
Helix 7
AA7
A
274 283Right-handed alpha
Helix 8
AA8
A
307 316Right-handed alpha
Helix 9
AA9
A
334 336Right-handed 310
Helix 10
AB1
A
337 348Right-handed alpha
Helix 11
AB2
A
369 373Right-handed 310
Helix 12
AB3
A
376 378Right-handed 310
Helix 13
AB4
A
379 391Right-handed alpha
Helix 14
AB5
A
433 451Right-handed alpha
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There are 2 sheets in PDB entry 6ZDC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
319 321parallel
Strand 3
A
298 302parallel
Strand 4
A
264 267parallel
Strand 5
A
218 223parallel
Strand 6
A
181 188parallel
Strand 7
A
100 107parallel
Strand 8
A
397 399parallel
Strand 9
A
355 356parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 255first strand
Strand 2
A
261 262anti-parallel
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