Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZDX entry

There are 2 chains in PDB entry 6ZDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 163TRP 262
B
 HIS 2SER 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6ZDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
165 182Right-handed alpha
Helix 2
AA2
A
185 191Right-handed alpha
Helix 3
AA3
A
192 198Right-handed 310
Helix 4
AA4
A
199 205Right-handed alpha
Helix 5
AA5
A
207 221Right-handed alpha
Helix 6
AA6
A
222 227Right-handed 310
Helix 7
AA7
A
229 234Right-handed alpha
Helix 8
AA8
A
241 260Right-handed alpha
Helix 9
AA9
B
44 50Right-handed 310
Helix 10
AB1
B
51 56Right-handed alpha
Helix 11
AB2
B
151 154Right-handed 310
Helix 12
AB3
B
265 269Right-handed 310
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There are 9 sheets in PDB entry 6ZDX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
22 27anti-parallel
Strand 3
B
59 62anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
91 96parallel
Strand 3
B
71 76anti-parallel
Strand 4
B
36 39anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 107first strand
Strand 2
B
118 123anti-parallel
Strand 3
B
156 161anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 113first strand
Strand 2
B
195 197parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
130 136anti-parallel
Strand 3
B
171 177anti-parallel
Strand 4
B
192 193anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 208first strand
Strand 2
B
219 225anti-parallel
Strand 3
B
255 261anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 213first strand
Strand 2
B
291 295parallel
Strand 3
B
270 277anti-parallel
Strand 4
B
231 236anti-parallel
Strand 5
B
243 245anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 307first strand
Strand 2
B
318 325anti-parallel
Strand 3
B
354 363anti-parallel
Strand 4
B
349 351anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
312 313first strand
Strand 2
B
392 396parallel
Strand 3
B
370 377anti-parallel
Strand 4
B
331 336anti-parallel
Strand 5
B
344 347anti-parallel
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