Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZE2 entry

There are 2 chains in PDB entry 6ZE2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 46	ALA 630
B	ASN 46	ALA 630

There are 55 helices in PDB entry 6ZE2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	55	66	Right-handed alpha
Helix 2	AA2	A	85	90	Right-handed alpha
Helix 3	AA3	A	91	94	Right-handed 310
Helix 4	AA4	A	95	100	Right-handed 310
Helix 5	AA5	A	109	113	Right-handed 310
Helix 6	AA6	A	127	132	Right-handed alpha
Helix 7	AA7	A	140	150	Right-handed alpha
Helix 8	AA8	A	156	167	Right-handed alpha
Helix 9	AA9	A	174	182	Right-handed alpha
Helix 10	AB1	A	186	190	Right-handed 310
Helix 11	AB2	A	206	218	Right-handed alpha
Helix 12	AB3	A	250	255	Right-handed alpha
Helix 13	AB4	A	256	260	Right-handed 310
Helix 14	AB5	A	314	322	Right-handed alpha
Helix 15	AB6	A	326	334	Right-handed alpha
Helix 16	AB7	A	367	374	Right-handed alpha
Helix 17	AB8	A	374	389	Right-handed alpha
Helix 18	AB9	A	391	395	Right-handed 310
Helix 19	AC1	A	407	412	Right-handed alpha
Helix 20	AC2	A	415	426	Right-handed alpha
Helix 21	AC3	A	427	432	Right-handed 310
Helix 22	AC4	A	437	457	Right-handed alpha
Helix 23	AC5	A	507	526	Right-handed alpha
Helix 24	AC6	A	526	531	Right-handed alpha
Helix 25	AC7	A	546	558	Right-handed alpha
Helix 26	AC8	A	573	577	Right-handed 310
Helix 27	AC9	A	596	600	Right-handed 310
Helix 28	AD1	A	608	627	Right-handed alpha
Helix 29	AD2	B	55	67	Right-handed alpha
Helix 30	AD3	B	85	90	Right-handed alpha
Helix 31	AD4	B	91	94	Right-handed 310
Helix 32	AD5	B	95	100	Right-handed 310
Helix 33	AD6	B	127	132	Right-handed alpha
Helix 34	AD7	B	140	150	Right-handed alpha
Helix 35	AD8	B	156	167	Right-handed alpha
Helix 36	AD9	B	174	182	Right-handed alpha
Helix 37	AE1	B	186	190	Right-handed 310
Helix 38	AE2	B	206	218	Right-handed alpha
Helix 39	AE3	B	250	255	Right-handed alpha
Helix 40	AE4	B	256	260	Right-handed 310
Helix 41	AE5	B	314	322	Right-handed alpha
Helix 42	AE6	B	326	334	Right-handed alpha
Helix 43	AE7	B	369	374	Right-handed alpha
Helix 44	AE8	B	374	389	Right-handed alpha
Helix 45	AE9	B	391	395	Right-handed 310
Helix 46	AF1	B	407	412	Right-handed alpha
Helix 47	AF2	B	415	426	Right-handed alpha
Helix 48	AF3	B	427	432	Right-handed 310
Helix 49	AF4	B	437	457	Right-handed alpha
Helix 50	AF5	B	507	526	Right-handed alpha
Helix 51	AF6	B	526	531	Right-handed alpha
Helix 52	AF7	B	546	558	Right-handed alpha
Helix 53	AF8	B	573	577	Right-handed 310
Helix 54	AF9	B	596	600	Right-handed 310
Helix 55	AG1	B	608	628	Right-handed alpha

There are 14 sheets in PDB entry 6ZE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	73	76	parallel
Strand 3	A	47	52	parallel
Strand 4	A	298	308	parallel
Strand 5	A	282	290	anti-parallel
Strand 6	A	271	279	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	73	76	parallel
Strand 3	A	47	52	parallel
Strand 4	A	298	308	parallel
Strand 5	A	592	594	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	170	first strand
Strand 2	A	196	198	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	236	first strand
Strand 2	A	402	406	anti-parallel
Strand 3	A	463	467	anti-parallel
Strand 4	A	472	477	anti-parallel
Strand 5	A	353	360	anti-parallel
Strand 6	A	534	536	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	247	248	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	325	first strand
Strand 2	A	339	340	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	487	first strand
Strand 2	A	498	500	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	73	76	parallel
Strand 3	B	47	52	parallel
Strand 4	B	298	308	parallel
Strand 5	B	282	290	anti-parallel
Strand 6	B	271	279	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	73	76	parallel
Strand 3	B	47	52	parallel
Strand 4	B	298	308	parallel
Strand 5	B	592	594	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	170	first strand
Strand 2	B	196	198	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	236	first strand
Strand 2	B	402	406	anti-parallel
Strand 3	B	463	467	anti-parallel
Strand 4	B	472	477	anti-parallel
Strand 5	B	353	360	anti-parallel
Strand 6	B	534	536	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	247	248	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	325	first strand
Strand 2	B	339	340	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	487	first strand
Strand 2	B	498	500	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZE2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE2