Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZE4 entry

There are 2 chains in PDB entry 6ZE4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 46	ALA 630
B	ASN 46	LEU 629

There are 54 helices in PDB entry 6ZE4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	55	66	Right-handed alpha
Helix 2	AA2	A	85	90	Right-handed alpha
Helix 3	AA3	A	91	94	Right-handed 310
Helix 4	AA4	A	95	100	Right-handed 310
Helix 5	AA5	A	127	132	Right-handed alpha
Helix 6	AA6	A	140	150	Right-handed alpha
Helix 7	AA7	A	156	167	Right-handed alpha
Helix 8	AA8	A	174	182	Right-handed alpha
Helix 9	AA9	A	186	190	Right-handed 310
Helix 10	AB1	A	206	218	Right-handed alpha
Helix 11	AB2	A	250	255	Right-handed alpha
Helix 12	AB3	A	256	260	Right-handed 310
Helix 13	AB4	A	314	322	Right-handed alpha
Helix 14	AB5	A	326	333	Right-handed alpha
Helix 15	AB6	A	369	374	Right-handed alpha
Helix 16	AB7	A	374	389	Right-handed alpha
Helix 17	AB8	A	391	395	Right-handed 310
Helix 18	AB9	A	407	412	Right-handed alpha
Helix 19	AC1	A	415	426	Right-handed alpha
Helix 20	AC2	A	427	432	Right-handed 310
Helix 21	AC3	A	437	457	Right-handed alpha
Helix 22	AC4	A	507	526	Right-handed alpha
Helix 23	AC5	A	526	531	Right-handed alpha
Helix 24	AC6	A	546	558	Right-handed alpha
Helix 25	AC7	A	573	577	Right-handed 310
Helix 26	AC8	A	596	600	Right-handed 310
Helix 27	AC9	A	608	628	Right-handed alpha
Helix 28	AD1	B	55	66	Right-handed alpha
Helix 29	AD2	B	85	90	Right-handed alpha
Helix 30	AD3	B	91	94	Right-handed 310
Helix 31	AD4	B	95	100	Right-handed 310
Helix 32	AD5	B	127	132	Right-handed alpha
Helix 33	AD6	B	140	150	Right-handed alpha
Helix 34	AD7	B	156	167	Right-handed alpha
Helix 35	AD8	B	174	182	Right-handed alpha
Helix 36	AD9	B	186	190	Right-handed 310
Helix 37	AE1	B	206	218	Right-handed alpha
Helix 38	AE2	B	250	255	Right-handed alpha
Helix 39	AE3	B	256	260	Right-handed 310
Helix 40	AE4	B	314	322	Right-handed alpha
Helix 41	AE5	B	326	334	Right-handed alpha
Helix 42	AE6	B	369	374	Right-handed alpha
Helix 43	AE7	B	374	389	Right-handed alpha
Helix 44	AE8	B	391	395	Right-handed 310
Helix 45	AE9	B	407	412	Right-handed alpha
Helix 46	AF1	B	415	426	Right-handed alpha
Helix 47	AF2	B	427	432	Right-handed 310
Helix 48	AF3	B	437	457	Right-handed alpha
Helix 49	AF4	B	506	526	Right-handed alpha
Helix 50	AF5	B	526	531	Right-handed alpha
Helix 51	AF6	B	546	558	Right-handed alpha
Helix 52	AF7	B	573	577	Right-handed 310
Helix 53	AF8	B	596	600	Right-handed 310
Helix 54	AF9	B	608	627	Right-handed alpha

There are 14 sheets in PDB entry 6ZE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	73	76	parallel
Strand 3	A	47	52	parallel
Strand 4	A	298	308	parallel
Strand 5	A	282	290	anti-parallel
Strand 6	A	271	279	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	73	76	parallel
Strand 3	A	47	52	parallel
Strand 4	A	298	308	parallel
Strand 5	A	592	594	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	170	first strand
Strand 2	A	196	198	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	236	first strand
Strand 2	A	402	406	anti-parallel
Strand 3	A	463	467	anti-parallel
Strand 4	A	472	477	anti-parallel
Strand 5	A	353	360	anti-parallel
Strand 6	A	534	536	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	247	248	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	325	first strand
Strand 2	A	339	340	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	487	first strand
Strand 2	A	498	500	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	73	76	parallel
Strand 3	B	47	52	parallel
Strand 4	B	298	308	parallel
Strand 5	B	282	290	anti-parallel
Strand 6	B	271	279	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	73	76	parallel
Strand 3	B	47	52	parallel
Strand 4	B	298	308	parallel
Strand 5	B	592	594	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	170	first strand
Strand 2	B	196	198	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	236	first strand
Strand 2	B	402	406	anti-parallel
Strand 3	B	463	467	anti-parallel
Strand 4	B	472	477	anti-parallel
Strand 5	B	353	360	anti-parallel
Strand 6	B	534	536	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	247	248	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	325	first strand
Strand 2	B	339	340	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	487	first strand
Strand 2	B	498	500	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZE4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE4