Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZE8 entry

There are 4 chains in PDB entry 6ZE8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 22	SER 386
B	ALA 22	SER 386
C	ALA 22	SER 386
D	ALA 22	LEU 178

There are102 helices in PDB entry 6ZE8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	35	Right-handed 310
Helix 2	AA2	A	36	40	Right-handed 310
Helix 3	AA3	A	42	46	Right-handed 310
Helix 4	AA4	A	72	83	Right-handed alpha
Helix 5	AA5	A	84	86	Right-handed 310
Helix 6	AA6	A	104	111	Right-handed alpha
Helix 7	AA7	A	112	131	Right-handed alpha
Helix 8	AA8	A	150	174	Right-handed alpha
Helix 9	AA9	A	187	195	Right-handed alpha
Helix 10	AB1	A	196	204	Right-handed alpha
Helix 11	AB2	A	235	241	Right-handed 310
Helix 12	AB3	A	242	253	Right-handed alpha
Helix 13	AB4	A	256	258	Right-handed 310
Helix 14	AB5	A	303	307	Right-handed alpha
Helix 15	AB6	A	336	350	Right-handed alpha
Helix 16	AB7	A	359	363	Right-handed 310
Helix 17	AB8	A	375	386	Right-handed alpha
Helix 18	AB9	B	31	35	Right-handed 310
Helix 19	AC1	B	36	40	Right-handed 310
Helix 20	AC2	B	42	46	Right-handed 310
Helix 21	AC3	B	72	82	Right-handed alpha
Helix 22	AC4	B	83	86	Right-handed 310
Helix 23	AC5	B	103	111	Right-handed alpha
Helix 24	AC6	B	112	131	Right-handed alpha
Helix 25	AC7	B	150	174	Right-handed alpha
Helix 26	AC8	B	187	195	Right-handed alpha
Helix 27	AC9	B	196	204	Right-handed alpha
Helix 28	AD1	B	235	241	Right-handed 310
Helix 29	AD2	B	242	253	Right-handed alpha
Helix 30	AD3	B	256	258	Right-handed 310
Helix 31	AD4	B	303	307	Right-handed alpha
Helix 32	AD5	B	336	350	Right-handed alpha
Helix 33	AD6	B	359	363	Right-handed 310
Helix 34	AD7	B	375	386	Right-handed alpha
Helix 35	AD8	C	31	35	Right-handed 310
Helix 36	AD9	C	36	40	Right-handed 310
Helix 37	AE1	C	42	46	Right-handed 310
Helix 38	AE2	C	72	83	Right-handed alpha
Helix 39	AE3	C	84	86	Right-handed 310
Helix 40	AE4	C	103	111	Right-handed alpha
Helix 41	AE5	C	112	131	Right-handed alpha
Helix 42	AE6	C	150	174	Right-handed alpha
Helix 43	AE7	C	187	195	Right-handed alpha
Helix 44	AE8	C	196	204	Right-handed alpha
Helix 45	AE9	C	235	241	Right-handed 310
Helix 46	AF1	C	242	253	Right-handed alpha
Helix 47	AF2	C	256	258	Right-handed 310
Helix 48	AF3	C	303	307	Right-handed alpha
Helix 49	AF4	C	336	350	Right-handed alpha
Helix 50	AF5	C	359	363	Right-handed 310
Helix 51	AF6	C	375	385	Right-handed alpha
Helix 52	AF7	D	31	35	Right-handed 310
Helix 53	AF8	D	36	40	Right-handed 310
Helix 54	AF9	D	42	46	Right-handed 310
Helix 55	AG1	D	72	83	Right-handed alpha
Helix 56	AG2	D	84	86	Right-handed 310
Helix 57	AG3	D	103	111	Right-handed alpha
Helix 58	AG4	D	112	131	Right-handed alpha
Helix 59	AG5	D	150	174	Right-handed alpha
Helix 60	AG6	D	187	195	Right-handed alpha
Helix 61	AG7	D	196	204	Right-handed alpha
Helix 62	AG8	D	235	241	Right-handed 310
Helix 63	AG9	D	242	253	Right-handed alpha
Helix 64	AH1	D	256	258	Right-handed 310
Helix 65	AH2	D	303	307	Right-handed alpha
Helix 66	AH3	D	336	350	Right-handed alpha
Helix 67	AH4	D	359	363	Right-handed 310
Helix 68	AH5	D	375	386	Right-handed alpha
Helix 69	AH6	E	31	35	Right-handed 310
Helix 70	AH7	E	36	40	Right-handed 310
Helix 71	AH8	E	42	46	Right-handed 310
Helix 72	AH9	E	72	83	Right-handed alpha
Helix 73	AI1	E	84	86	Right-handed 310
Helix 74	AI2	E	104	111	Right-handed alpha
Helix 75	AI3	E	112	131	Right-handed alpha
Helix 76	AI4	E	150	174	Right-handed alpha
Helix 77	AI5	E	187	195	Right-handed alpha
Helix 78	AI6	E	196	202	Right-handed alpha
Helix 79	AI7	E	235	241	Right-handed 310
Helix 80	AI8	E	242	253	Right-handed alpha
Helix 81	AI9	E	256	258	Right-handed 310
Helix 82	AJ1	E	303	307	Right-handed alpha
Helix 83	AJ2	E	336	350	Right-handed alpha
Helix 84	AJ3	E	359	363	Right-handed 310
Helix 85	AJ4	E	375	386	Right-handed alpha
Helix 86	AJ5	F	31	35	Right-handed 310
Helix 87	AJ6	F	36	40	Right-handed 310
Helix 88	AJ7	F	42	46	Right-handed 310
Helix 89	AJ8	F	72	82	Right-handed alpha
Helix 90	AJ9	F	83	86	Right-handed 310
Helix 91	AK1	F	103	111	Right-handed alpha
Helix 92	AK2	F	112	131	Right-handed alpha
Helix 93	AK3	F	150	174	Right-handed alpha
Helix 94	AK4	F	187	195	Right-handed alpha
Helix 95	AK5	F	196	204	Right-handed alpha
Helix 96	AK6	F	235	241	Right-handed 310
Helix 97	AK7	F	242	253	Right-handed alpha
Helix 98	AK8	F	256	258	Right-handed 310
Helix 99	AK9	F	303	307	Right-handed alpha
Helix 100	AL1	F	336	350	Right-handed alpha
Helix 101	AL2	F	359	363	Right-handed 310
Helix 102	AL3	F	375	386	Right-handed alpha

There are 18 sheets in PDB entry 6ZE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	53	62	anti-parallel
Strand 3	A	91	97	parallel
Strand 4	A	134	138	parallel
Strand 5	A	179	185	parallel
Strand 6	A	206	210	parallel
Strand 7	A	260	265	parallel
Strand 8	A	354	358	parallel
Strand 9	A	23	29	parallel
Strand 10	A	53	62	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	288	first strand
Strand 2	A	267	273	anti-parallel
Strand 3	A	300	302	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	288	first strand
Strand 2	A	267	273	anti-parallel
Strand 3	A	330	333	anti-parallel
Strand 4	A	322	327	anti-parallel
Strand 5	A	313	317	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	53	62	anti-parallel
Strand 3	B	91	97	parallel
Strand 4	B	134	138	parallel
Strand 5	B	179	184	parallel
Strand 6	B	206	209	parallel
Strand 7	B	260	265	parallel
Strand 8	B	354	358	parallel
Strand 9	B	23	29	parallel
Strand 10	B	53	62	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	288	first strand
Strand 2	B	267	273	anti-parallel
Strand 3	B	300	302	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	288	first strand
Strand 2	B	267	273	anti-parallel
Strand 3	B	330	333	anti-parallel
Strand 4	B	322	327	anti-parallel
Strand 5	B	313	317	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	67	first strand
Strand 2	C	53	62	anti-parallel
Strand 3	C	91	97	parallel
Strand 4	C	134	138	parallel
Strand 5	C	179	185	parallel
Strand 6	C	206	210	parallel
Strand 7	C	260	265	parallel
Strand 8	C	354	358	parallel
Strand 9	C	23	29	parallel
Strand 10	C	53	62	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	288	first strand
Strand 2	C	267	273	anti-parallel
Strand 3	C	300	302	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	288	first strand
Strand 2	C	267	273	anti-parallel
Strand 3	C	330	333	anti-parallel
Strand 4	C	322	327	anti-parallel
Strand 5	C	313	317	anti-parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	67	first strand
Strand 2	D	53	62	anti-parallel
Strand 3	D	91	97	parallel
Strand 4	D	134	138	parallel
Strand 5	D	179	185	parallel
Strand 6	D	206	210	parallel
Strand 7	D	260	265	parallel
Strand 8	D	354	358	parallel
Strand 9	D	23	29	parallel
Strand 10	D	53	62	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	288	first strand
Strand 2	D	267	273	anti-parallel
Strand 3	D	300	302	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	288	first strand
Strand 2	D	267	273	anti-parallel
Strand 3	D	330	333	anti-parallel
Strand 4	D	322	327	anti-parallel
Strand 5	D	313	317	anti-parallel

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There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	53	62	anti-parallel
Strand 3	E	91	97	parallel
Strand 4	E	134	138	parallel
Strand 5	E	179	185	parallel
Strand 6	E	206	210	parallel
Strand 7	E	260	265	parallel
Strand 8	E	354	358	parallel
Strand 9	E	23	29	parallel
Strand 10	E	53	62	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	285	288	first strand
Strand 2	E	267	273	anti-parallel
Strand 3	E	300	302	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	285	288	first strand
Strand 2	E	267	273	anti-parallel
Strand 3	E	330	333	anti-parallel
Strand 4	E	322	327	anti-parallel
Strand 5	E	313	317	anti-parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	67	first strand
Strand 2	F	53	62	anti-parallel
Strand 3	F	91	97	parallel
Strand 4	F	134	138	parallel
Strand 5	F	179	185	parallel
Strand 6	F	206	210	parallel
Strand 7	F	260	265	parallel
Strand 8	F	354	358	parallel
Strand 9	F	23	29	parallel
Strand 10	F	53	62	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	285	288	first strand
Strand 2	F	267	273	anti-parallel
Strand 3	F	300	302	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	285	288	first strand
Strand 2	F	267	273	anti-parallel
Strand 3	F	330	333	anti-parallel
Strand 4	F	322	327	anti-parallel
Strand 5	F	313	317	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZE8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZE8