Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZEJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZEJ entry

There are 2 chains in PDB entry 6ZEJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	LEU 6	PRO 364
A	LEU 6	ILE 294

There are 84 helices in PDB entry 6ZEJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	7	17	Right-handed alpha
Helix 2	AA2	D	30	48	Right-handed alpha
Helix 3	AA3	D	67	79	Right-handed alpha
Helix 4	AA4	D	98	113	Right-handed alpha
Helix 5	AA5	D	126	131	Right-handed alpha
Helix 6	AA6	D	134	143	Right-handed alpha
Helix 7	AA7	D	144	156	Right-handed alpha
Helix 8	AA8	D	181	187	Right-handed alpha
Helix 9	AA9	D	198	206	Right-handed alpha
Helix 10	AB1	D	227	239	Right-handed alpha
Helix 11	AB2	D	270	274	Right-handed 310
Helix 12	AB3	D	324	329	Right-handed 310
Helix 13	AB4	D	330	348	Right-handed alpha
Helix 14	AB5	D	352	359	Right-handed 310
Helix 15	AB6	A	7	17	Right-handed alpha
Helix 16	AB7	A	30	48	Right-handed alpha
Helix 17	AB8	A	67	79	Right-handed alpha
Helix 18	AB9	A	98	113	Right-handed alpha
Helix 19	AC1	A	126	131	Right-handed alpha
Helix 20	AC2	A	134	143	Right-handed alpha
Helix 21	AC3	A	144	156	Right-handed alpha
Helix 22	AC4	A	181	187	Right-handed alpha
Helix 23	AC5	A	198	206	Right-handed alpha
Helix 24	AC6	A	227	238	Right-handed alpha
Helix 25	AC7	A	270	274	Right-handed 310
Helix 26	AC8	A	324	329	Right-handed 310
Helix 27	AC9	A	330	348	Right-handed alpha
Helix 28	AD1	A	352	359	Right-handed 310
Helix 29	AD2	F	7	17	Right-handed alpha
Helix 30	AD3	F	30	48	Right-handed alpha
Helix 31	AD4	F	67	79	Right-handed alpha
Helix 32	AD5	F	98	113	Right-handed alpha
Helix 33	AD6	F	126	131	Right-handed alpha
Helix 34	AD7	F	134	143	Right-handed alpha
Helix 35	AD8	F	144	156	Right-handed alpha
Helix 36	AD9	F	182	187	Right-handed alpha
Helix 37	AE1	F	198	206	Right-handed alpha
Helix 38	AE2	F	227	239	Right-handed alpha
Helix 39	AE3	F	270	274	Right-handed 310
Helix 40	AE4	F	324	329	Right-handed 310
Helix 41	AE5	F	330	348	Right-handed alpha
Helix 42	AE6	F	352	359	Right-handed 310
Helix 43	AE7	I	7	17	Right-handed alpha
Helix 44	AE8	I	30	48	Right-handed alpha
Helix 45	AE9	I	67	79	Right-handed alpha
Helix 46	AF1	I	98	113	Right-handed alpha
Helix 47	AF2	I	126	131	Right-handed alpha
Helix 48	AF3	I	134	143	Right-handed alpha
Helix 49	AF4	I	144	156	Right-handed alpha
Helix 50	AF5	I	181	187	Right-handed alpha
Helix 51	AF6	I	198	206	Right-handed alpha
Helix 52	AF7	I	227	238	Right-handed alpha
Helix 53	AF8	I	270	274	Right-handed 310
Helix 54	AF9	I	324	329	Right-handed 310
Helix 55	AG1	I	330	348	Right-handed alpha
Helix 56	AG2	I	352	359	Right-handed 310
Helix 57	AG3	L	7	18	Right-handed alpha
Helix 58	AG4	L	30	48	Right-handed alpha
Helix 59	AG5	L	67	79	Right-handed alpha
Helix 60	AG6	L	98	113	Right-handed alpha
Helix 61	AG7	L	126	131	Right-handed alpha
Helix 62	AG8	L	134	143	Right-handed alpha
Helix 63	AG9	L	144	156	Right-handed alpha
Helix 64	AH1	L	182	187	Right-handed alpha
Helix 65	AH2	L	198	206	Right-handed alpha
Helix 66	AH3	L	227	238	Right-handed alpha
Helix 67	AH4	L	270	274	Right-handed 310
Helix 68	AH5	L	324	329	Right-handed 310
Helix 69	AH6	L	330	348	Right-handed alpha
Helix 70	AH7	L	352	359	Right-handed 310
Helix 71	AH8	O	7	17	Right-handed alpha
Helix 72	AH9	O	30	48	Right-handed alpha
Helix 73	AI1	O	67	79	Right-handed alpha
Helix 74	AI2	O	98	113	Right-handed alpha
Helix 75	AI3	O	126	131	Right-handed alpha
Helix 76	AI4	O	134	143	Right-handed alpha
Helix 77	AI5	O	144	156	Right-handed alpha
Helix 78	AI6	O	181	187	Right-handed alpha
Helix 79	AI7	O	198	206	Right-handed alpha
Helix 80	AI8	O	227	239	Right-handed alpha
Helix 81	AI9	O	270	274	Right-handed 310
Helix 82	AJ1	O	324	329	Right-handed 310
Helix 83	AJ2	O	330	348	Right-handed alpha
Helix 84	AJ3	O	352	359	Right-handed 310

There are 18 sheets in PDB entry 6ZEJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	161	164	parallel
Strand 3	D	168	170	anti-parallel
Strand 4	D	242	245	parallel
Strand 5	D	262	265	parallel
Strand 6	D	254	257	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	119	first strand
Strand 2	D	86	88	parallel
Strand 3	D	58	61	parallel
Strand 4	D	279	284	anti-parallel
Strand 5	D	290	296	anti-parallel
Strand 6	D	311	314	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	208	first strand
Strand 2	D	224	226	parallel
Strand 3	D	215	217	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	161	164	parallel
Strand 3	A	168	170	anti-parallel
Strand 4	A	242	245	parallel
Strand 5	A	262	265	parallel
Strand 6	A	254	257	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	119	first strand
Strand 2	A	86	88	parallel
Strand 3	A	58	61	parallel
Strand 4	A	279	284	anti-parallel
Strand 5	A	290	296	anti-parallel
Strand 6	A	310	314	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	208	first strand
Strand 2	A	224	226	parallel
Strand 3	A	215	217	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	54	first strand
Strand 2	F	161	164	parallel
Strand 3	F	168	170	anti-parallel
Strand 4	F	242	245	parallel
Strand 5	F	262	265	parallel
Strand 6	F	254	257	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	117	119	first strand
Strand 2	F	86	88	parallel
Strand 3	F	58	61	parallel
Strand 4	F	279	284	anti-parallel
Strand 5	F	290	296	anti-parallel
Strand 6	F	311	314	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	208	first strand
Strand 2	F	224	226	parallel
Strand 3	F	215	217	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	51	54	first strand
Strand 2	I	161	164	parallel
Strand 3	I	168	170	anti-parallel
Strand 4	I	242	245	parallel
Strand 5	I	262	265	parallel
Strand 6	I	254	257	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	117	119	first strand
Strand 2	I	86	88	parallel
Strand 3	I	58	61	parallel
Strand 4	I	279	284	anti-parallel
Strand 5	I	290	296	anti-parallel
Strand 6	I	311	314	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	207	208	first strand
Strand 2	I	224	226	parallel
Strand 3	I	215	217	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	51	54	first strand
Strand 2	L	161	164	parallel
Strand 3	L	168	171	anti-parallel
Strand 4	L	242	245	parallel
Strand 5	L	262	265	parallel
Strand 6	L	254	257	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	119	first strand
Strand 2	L	86	88	parallel
Strand 3	L	58	61	parallel
Strand 4	L	279	284	anti-parallel
Strand 5	L	290	297	anti-parallel
Strand 6	L	311	315	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	207	208	first strand
Strand 2	L	224	226	parallel
Strand 3	L	215	217	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	51	54	first strand
Strand 2	O	161	164	parallel
Strand 3	O	168	170	anti-parallel
Strand 4	O	242	245	parallel
Strand 5	O	262	265	parallel
Strand 6	O	254	257	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	117	119	first strand
Strand 2	O	86	88	parallel
Strand 3	O	58	61	parallel
Strand 4	O	279	284	anti-parallel
Strand 5	O	290	296	anti-parallel
Strand 6	O	310	314	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	207	208	first strand
Strand 2	O	224	226	parallel
Strand 3	O	215	217	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZEJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZEJ