Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZGA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZGA entry

There are 4 chains in PDB entry 6ZGA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 2	ALA 768
B	ARG 133	LYS 926
C	HIS 23	ILE 190
D	PRO 1801	PRO 1801

There are117 helices in PDB entry 6ZGA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	11	Right-handed alpha
Helix 2	AA2	A	22	28	Right-handed alpha
Helix 3	AA3	A	102	106	Right-handed 310
Helix 4	AA4	A	133	151	Right-handed alpha
Helix 5	AA5	A	189	196	Right-handed alpha
Helix 6	AA6	A	204	206	Right-handed 310
Helix 7	AA7	A	207	218	Right-handed alpha
Helix 8	AA8	A	224	228	Right-handed 310
Helix 9	AA9	A	231	244	Right-handed alpha
Helix 10	AB1	A	261	277	Right-handed alpha
Helix 11	AB2	A	310	316	Right-handed alpha
Helix 12	AB3	A	322	340	Right-handed alpha
Helix 13	AB4	A	354	358	Right-handed 310
Helix 14	AB5	A	359	364	Right-handed alpha
Helix 15	AB6	A	377	385	Right-handed alpha
Helix 16	AB7	A	516	522	Right-handed alpha
Helix 17	AB8	A	524	541	Right-handed alpha
Helix 18	AB9	A	544	564	Right-handed alpha
Helix 19	AC1	A	577	580	Right-handed 310
Helix 20	AC2	A	581	592	Right-handed alpha
Helix 21	AC3	A	602	614	Right-handed alpha
Helix 22	AC4	A	617	626	Right-handed alpha
Helix 23	AC5	A	667	676	Right-handed alpha
Helix 24	AC6	A	684	701	Right-handed alpha
Helix 25	AC7	A	718	720	Right-handed 310
Helix 26	AC8	A	721	728	Right-handed alpha
Helix 27	AC9	A	751	762	Right-handed alpha
Helix 28	AD1	B	150	156	Right-handed 310
Helix 29	AD2	B	192	200	Right-handed alpha
Helix 30	AD3	B	273	277	Right-handed 310
Helix 31	AD4	B	280	285	Right-handed alpha
Helix 32	AD5	B	313	320	Right-handed alpha
Helix 33	AD6	B	320	331	Right-handed alpha
Helix 34	AD7	B	399	414	Right-handed alpha
Helix 35	AD8	B	423	436	Right-handed alpha
Helix 36	AD9	B	481	494	Right-handed alpha
Helix 37	AE1	B	509	518	Right-handed alpha
Helix 38	AE2	B	534	549	Right-handed alpha
Helix 39	AE3	B	638	645	Right-handed alpha
Helix 40	AE4	B	647	666	Right-handed alpha
Helix 41	AE5	B	668	690	Right-handed alpha
Helix 42	AE6	B	706	708	Right-handed 310
Helix 43	AE7	B	709	719	Right-handed alpha
Helix 44	AE8	B	729	743	Right-handed alpha
Helix 45	AE9	B	744	753	Right-handed alpha
Helix 46	AF1	B	790	794	Right-handed 310
Helix 47	AF2	B	817	825	Right-handed alpha
Helix 48	AF3	B	829	833	Right-handed 310
Helix 49	AF4	B	847	861	Right-handed alpha
Helix 50	AF5	B	884	899	Right-handed alpha
Helix 51	AF6	B	900	902	Right-handed 310
Helix 52	AF7	B	912	924	Right-handed alpha
Helix 53	AF8	C	35	46	Right-handed alpha
Helix 54	AF9	C	78	82	Right-handed 310
Helix 55	AG1	C	83	88	Right-handed alpha
Helix 56	AG2	C	105	118	Right-handed alpha
Helix 57	AG3	C	119	125	Right-handed 310
Helix 58	AG4	C	141	149	Right-handed alpha
Helix 59	AG5	C	179	187	Right-handed alpha
Helix 60	AG6	E	3	11	Right-handed alpha
Helix 61	AG7	E	22	29	Right-handed alpha
Helix 62	AG8	E	91	95	Right-handed 310
Helix 63	AG9	E	102	106	Right-handed 310
Helix 64	AH1	E	133	151	Right-handed alpha
Helix 65	AH2	E	189	199	Right-handed alpha
Helix 66	AH3	E	204	206	Right-handed 310
Helix 67	AH4	E	207	218	Right-handed alpha
Helix 68	AH5	E	223	227	Right-handed 310
Helix 69	AH6	E	234	244	Right-handed alpha
Helix 70	AH7	E	261	277	Right-handed alpha
Helix 71	AH8	E	310	317	Right-handed alpha
Helix 72	AH9	E	322	340	Right-handed alpha
Helix 73	AI1	E	354	358	Right-handed 310
Helix 74	AI2	E	359	364	Right-handed alpha
Helix 75	AI3	E	377	386	Right-handed alpha
Helix 76	AI4	E	524	541	Right-handed alpha
Helix 77	AI5	E	545	564	Right-handed alpha
Helix 78	AI6	E	581	592	Right-handed alpha
Helix 79	AI7	E	602	614	Right-handed alpha
Helix 80	AI8	E	617	626	Right-handed alpha
Helix 81	AI9	E	644	648	Right-handed 310
Helix 82	AJ1	E	667	677	Right-handed alpha
Helix 83	AJ2	E	684	703	Right-handed alpha
Helix 84	AJ3	E	721	728	Right-handed alpha
Helix 85	AJ4	E	751	762	Right-handed alpha
Helix 86	AJ5	F	144	146	Right-handed 310
Helix 87	AJ6	F	150	155	Right-handed 310
Helix 88	AJ7	F	192	200	Right-handed alpha
Helix 89	AJ8	F	274	279	Right-handed alpha
Helix 90	AJ9	F	280	285	Right-handed alpha
Helix 91	AK1	F	313	320	Right-handed alpha
Helix 92	AK2	F	320	331	Right-handed alpha
Helix 93	AK3	F	399	414	Right-handed alpha
Helix 94	AK4	F	423	436	Right-handed alpha
Helix 95	AK5	F	470	475	Right-handed alpha
Helix 96	AK6	F	481	494	Right-handed alpha
Helix 97	AK7	F	508	518	Right-handed alpha
Helix 98	AK8	F	533	550	Right-handed alpha
Helix 99	AK9	F	638	645	Right-handed alpha
Helix 100	AL1	F	647	666	Right-handed alpha
Helix 101	AL2	F	668	690	Right-handed alpha
Helix 102	AL3	F	706	708	Right-handed 310
Helix 103	AL4	F	709	718	Right-handed alpha
Helix 104	AL5	F	729	743	Right-handed alpha
Helix 105	AL6	F	744	753	Right-handed alpha
Helix 106	AL7	F	760	762	Right-handed 310
Helix 107	AL8	F	790	794	Right-handed 310
Helix 108	AL9	F	817	825	Right-handed alpha
Helix 109	AM1	F	846	861	Right-handed alpha
Helix 110	AM2	F	884	902	Right-handed alpha
Helix 111	AM3	F	912	925	Right-handed alpha
Helix 112	AM4	G	35	46	Right-handed alpha
Helix 113	AM5	G	78	87	Right-handed 310
Helix 114	AM6	G	105	119	Right-handed alpha
Helix 115	AM7	G	120	123	Right-handed 310
Helix 116	AM8	G	141	150	Right-handed alpha
Helix 117	AM9	G	179	187	Right-handed alpha

There are 30 sheets in PDB entry 6ZGA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	A	511	512	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	37	first strand
Strand 2	A	456	462	anti-parallel
Strand 3	A	412	418	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	77	79	anti-parallel
Strand 3	A	87	88	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	117	first strand
Strand 2	A	499	509	anti-parallel
Strand 3	A	485	495	anti-parallel
Strand 4	A	399	408	anti-parallel
Strand 5	A	444	450	anti-parallel
Strand 6	A	422	423	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	156	162	anti-parallel
Strand 3	A	123	129	parallel
Strand 4	A	283	288	parallel
Strand 5	A	342	347	parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	156	162	anti-parallel
Strand 3	A	166	169	anti-parallel
Strand 4	A	179	182	anti-parallel
Strand 5	B	376	378	parallel
Strand 6	B	354	355	anti-parallel
Strand 7	B	347	350	anti-parallel
Strand 8	B	306	311	parallel
Strand 9	B	440	446	parallel
Strand 10	B	495	501	parallel
Strand 11	B	523	525	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	567	first strand
Strand 2	A	570	575	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	628	632	first strand
Strand 2	A	653	657	anti-parallel
Strand 3	A	662	665	anti-parallel
Strand 4	A	712	714	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	142	first strand
Strand 2	B	702	704	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	223	first strand
Strand 2	B	288	291	parallel
Strand 3	B	624	634	anti-parallel
Strand 4	B	608	619	anti-parallel
Strand 5	B	553	562	anti-parallel
Strand 6	B	582	585	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	245	first strand
Strand 2	B	250	251	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	345	first strand
Strand 2	B	394	395	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	572	first strand
Strand 2	B	595	600	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	757	758	first strand
Strand 2	B	799	803	anti-parallel
Strand 3	B	808	812	anti-parallel
Strand 4	B	874	875	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	64	first strand
Strand 2	C	67	73	anti-parallel
Strand 3	C	24	30	parallel
Strand 4	C	93	99	parallel
Strand 5	C	127	132	parallel
Strand 6	C	168	169	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	511	512	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	456	462	anti-parallel
Strand 3	E	412	418	anti-parallel
Strand 4	E	439	440	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	72	first strand
Strand 2	E	77	79	anti-parallel
Strand 3	E	87	88	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	117	first strand
Strand 2	E	499	509	anti-parallel
Strand 3	E	485	495	anti-parallel
Strand 4	E	399	408	anti-parallel
Strand 5	E	444	450	anti-parallel
Strand 6	E	422	423	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	230	first strand
Strand 2	E	156	162	anti-parallel
Strand 3	E	123	128	parallel
Strand 4	E	282	288	parallel
Strand 5	E	341	347	parallel

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There are 11 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	230	first strand
Strand 2	E	156	162	anti-parallel
Strand 3	E	166	168	anti-parallel
Strand 4	E	180	182	anti-parallel
Strand 5	F	374	378	parallel
Strand 6	F	354	358	anti-parallel
Strand 7	F	347	350	anti-parallel
Strand 8	F	307	311	parallel
Strand 9	F	440	445	parallel
Strand 10	F	495	503	parallel
Strand 11	F	523	527	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	639	640	first strand
Strand 2	E	628	632	anti-parallel
Strand 3	E	653	657	anti-parallel
Strand 4	E	661	666	anti-parallel
Strand 5	E	710	715	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	142	first strand
Strand 2	F	702	704	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	190	first strand
Strand 2	F	623	636	parallel
Strand 3	F	287	290	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	190	first strand
Strand 2	F	623	636	parallel
Strand 3	F	608	619	anti-parallel
Strand 4	F	557	562	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	207	first strand
Strand 2	F	594	595	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	344	345	first strand
Strand 2	F	394	395	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	566	568	first strand
Strand 2	F	598	600	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	755	758	first strand
Strand 2	F	800	803	anti-parallel
Strand 3	F	808	811	anti-parallel
Strand 4	F	872	874	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	64	first strand
Strand 2	G	67	73	anti-parallel
Strand 3	G	25	30	parallel
Strand 4	G	93	99	parallel
Strand 5	G	127	132	parallel
Strand 6	G	166	170	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZGA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZGA