Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZGJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZGJ entry

There are 5 chains in PDB entry 6ZGJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	PHE 315
B	VAL 5	PHE 315
C	VAL 5	PHE 315
D	VAL 5	PHE 315
E	VAL 5	PHE 315

There are 30 helices in PDB entry 6ZGJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	194	198	Right-handed 310
Helix 2	AA2	A	202	214	Right-handed alpha
Helix 3	AA3	A	215	218	Right-handed 310
Helix 4	AA4	A	220	244	Right-handed alpha
Helix 5	AA5	A	253	282	Right-handed alpha
Helix 6	AA6	A	284	315	Right-handed alpha
Helix 7	AA7	B	194	198	Right-handed 310
Helix 8	AA8	B	202	214	Right-handed alpha
Helix 9	AA9	B	215	218	Right-handed 310
Helix 10	AB1	B	220	244	Right-handed alpha
Helix 11	AB2	B	253	282	Right-handed alpha
Helix 12	AB3	B	284	315	Right-handed alpha
Helix 13	AB4	C	194	198	Right-handed 310
Helix 14	AB5	C	202	214	Right-handed alpha
Helix 15	AB6	C	215	218	Right-handed 310
Helix 16	AB7	C	220	244	Right-handed alpha
Helix 17	AB8	C	253	282	Right-handed alpha
Helix 18	AB9	C	284	315	Right-handed alpha
Helix 19	AC1	D	194	198	Right-handed 310
Helix 20	AC2	D	202	214	Right-handed alpha
Helix 21	AC3	D	215	218	Right-handed 310
Helix 22	AC4	D	220	244	Right-handed alpha
Helix 23	AC5	D	253	282	Right-handed alpha
Helix 24	AC6	D	284	315	Right-handed alpha
Helix 25	AC7	E	194	198	Right-handed 310
Helix 26	AC8	E	202	214	Right-handed alpha
Helix 27	AC9	E	215	218	Right-handed 310
Helix 28	AD1	E	220	244	Right-handed alpha
Helix 29	AD2	E	253	282	Right-handed alpha
Helix 30	AD3	E	284	315	Right-handed alpha

There are 20 sheets in PDB entry 6ZGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	23	first strand
Strand 2	A	36	47	anti-parallel
Strand 3	A	29	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	23	first strand
Strand 2	A	36	47	anti-parallel
Strand 3	A	99	109	anti-parallel
Strand 4	A	86	95	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	184	192	anti-parallel
Strand 4	A	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	184	192	anti-parallel
Strand 4	A	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	23	first strand
Strand 2	B	36	47	anti-parallel
Strand 3	B	29	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	23	first strand
Strand 2	B	36	47	anti-parallel
Strand 3	B	99	109	anti-parallel
Strand 4	B	86	95	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	184	192	anti-parallel
Strand 4	B	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	184	192	anti-parallel
Strand 4	B	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	23	first strand
Strand 2	C	36	47	anti-parallel
Strand 3	C	29	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	23	first strand
Strand 2	C	36	47	anti-parallel
Strand 3	C	99	109	anti-parallel
Strand 4	C	86	95	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	184	192	anti-parallel
Strand 4	C	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	184	192	anti-parallel
Strand 4	C	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	23	first strand
Strand 2	D	36	47	anti-parallel
Strand 3	D	29	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	23	first strand
Strand 2	D	36	47	anti-parallel
Strand 3	D	99	109	anti-parallel
Strand 4	D	86	95	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	184	192	anti-parallel
Strand 4	D	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	184	192	anti-parallel
Strand 4	D	167	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	23	first strand
Strand 2	E	36	47	anti-parallel
Strand 3	E	29	31	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	23	first strand
Strand 2	E	36	47	anti-parallel
Strand 3	E	99	109	anti-parallel
Strand 4	E	86	95	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	184	192	anti-parallel
Strand 4	E	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	184	192	anti-parallel
Strand 4	E	167	169	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZGJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZGJ