Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZHI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZHI entry

There are 8 chains in PDB entry 6ZHI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 426	GLN 643
B	PRO 423	GLY 644
C	VAL 427	GLN 643
D	GLY 433	ALA 645
E	ASN 1	GLY 7
F	ASN 1	GLY 7
G	ASN 1	GLY 7
H	LEU 4	GLY 7

There are 17 helices in PDB entry 6ZHI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	542	556	Right-handed alpha
Helix 2	AA2	A	556	586	Right-handed alpha
Helix 3	AA3	A	587	593	Right-handed alpha
Helix 4	AA4	A	594	615	Right-handed alpha
Helix 5	AA5	A	619	643	Right-handed alpha
Helix 6	AA6	B	542	556	Right-handed alpha
Helix 7	AA7	B	556	586	Right-handed alpha
Helix 8	AA8	B	586	591	Right-handed alpha
Helix 9	AA9	B	594	615	Right-handed alpha
Helix 10	AB1	B	619	644	Right-handed alpha
Helix 11	AB2	C	480	484	Right-handed 310
Helix 12	AB3	C	542	586	Right-handed alpha
Helix 13	AB4	C	594	614	Right-handed alpha
Helix 14	AB5	C	619	643	Right-handed alpha
Helix 15	AB6	D	542	587	Right-handed alpha
Helix 16	AB7	D	594	615	Right-handed alpha
Helix 17	AB8	D	619	644	Right-handed alpha

There are 9 sheets in PDB entry 6ZHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	445	first strand
Strand 2	A	432	436	anti-parallel
Strand 3	A	468	475	anti-parallel
Strand 4	A	485	493	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	534	first strand
Strand 2	A	517	523	anti-parallel
Strand 3	A	505	511	anti-parallel
Strand 4	A	453	461	anti-parallel
Strand 5	E	3	5	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	445	first strand
Strand 2	B	432	436	anti-parallel
Strand 3	B	468	475	anti-parallel
Strand 4	B	485	493	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	534	first strand
Strand 2	B	517	523	anti-parallel
Strand 3	B	505	511	anti-parallel
Strand 4	B	453	461	anti-parallel
Strand 5	G	3	5	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	445	first strand
Strand 2	C	432	436	anti-parallel
Strand 3	C	468	475	anti-parallel
Strand 4	C	485	493	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	529	534	first strand
Strand 2	C	517	523	anti-parallel
Strand 3	C	505	511	anti-parallel
Strand 4	C	453	461	anti-parallel
Strand 5	F	3	5	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	436	first strand
Strand 2	D	440	442	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	453	459	first strand
Strand 2	D	505	511	anti-parallel
Strand 3	D	517	523	anti-parallel
Strand 4	D	529	534	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	468	475	first strand
Strand 2	D	485	493	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZHI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZHI