Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZIQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZIQ entry

There are 18 chains in PDB entry 6ZIQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
8
 MET 1PRO 41
a
 MET 1THR 226
d
 LEU 5THR 159
e
 PRO 2LEU 42
f
 PRO 5HIS 87
g
 THR 20ILE 98
j
 LEU 2LYS 49
k
 THR 12ARG 47
M
 PHE 8LEU 42
M
 GLN 44MET 75
N
 ASP 1LEU 42
N
 GLN 44MET 75
O
 SER 31LEU 42
O
 GLN 44ALA 74
b
 PRO 1GLN 209
h
 ASP 5PRO 66
S
 ARG 6GLU 188
C
 ALA 6ILE 94
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 6ZIQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
8
1 7Right-handed 310
Helix 2
AA2
8
8 21Right-handed alpha
Helix 3
AA3
8
22 30Right-handed alpha
Helix 4
AA4
a
5 10Right-handed 310
Helix 5
AA5
a
19 26Right-handed alpha
Helix 6
AA6
a
27 31Right-handed 310
Helix 7
AA7
a
40 59Right-handed alpha
Helix 8
AA8
a
62 67Right-handed alpha
Helix 9
AA9
a
68 87Right-handed alpha
Helix 10
AB1
a
97 119Right-handed alpha
Helix 11
AB2
a
121 127Right-handed alpha
Helix 12
AB3
a
134 136Right-handed 310
Helix 13
AB4
a
137 182Right-handed alpha
Helix 14
AB5
a
185 225Right-handed alpha
Helix 15
AB6
d
11 16Right-handed alpha
Helix 16
AB7
d
20 22Right-handed 310
Helix 17
AB8
d
23 44Right-handed alpha
Helix 18
AB9
d
52 60Right-handed alpha
Helix 19
AC1
d
64 76Right-handed alpha
Helix 20
AC2
d
87 89Right-handed 310
Helix 21
AC3
d
90 101Right-handed alpha
Helix 22
AC4
d
103 120Right-handed alpha
Helix 23
AC5
d
126 130Right-handed 310
Helix 24
AC6
d
131 139Right-handed alpha
Helix 25
AC7
e
7 42Right-handed alpha
Helix 26
AC8
f
18 26Right-handed alpha
Helix 27
AC9
f
29 49Right-handed alpha
Helix 28
AD1
f
56 74Right-handed alpha
Helix 29
AD2
f
75 79Right-handed 310
Helix 30
AD3
g
21 37Right-handed alpha
Helix 31
AD4
g
43 61Right-handed alpha
Helix 32
AD5
g
62 67Right-handed 310
Helix 33
AD6
g
68 94Right-handed alpha
Helix 34
AD7
j
3 10Right-handed alpha
Helix 35
AD8
j
13 19Right-handed alpha
Helix 36
AD9
j
21 47Right-handed alpha
Helix 37
AE1
k
13 18Right-handed alpha
Helix 38
AE2
k
22 45Right-handed alpha
Helix 39
AE3
M
9 15Right-handed alpha
Helix 40
AE4
M
17 39Right-handed alpha
Helix 41
AE5
M
42 74Right-handed alpha
Helix 42
AE6
N
2 15Right-handed alpha
Helix 43
AE7
N
17 39Right-handed alpha
Helix 44
AE8
N
42 74Right-handed alpha
Helix 45
AE9
O
32 38Right-handed alpha
Helix 46
AF1
O
42 72Right-handed alpha
Helix 47
AF2
b
19 30Right-handed alpha
Helix 48
AF3
b
32 48Right-handed alpha
Helix 49
AF4
b
54 121Right-handed alpha
Helix 50
AF5
b
122 186Right-handed alpha
Helix 51
AF6
b
189 209Right-handed alpha
Helix 52
AF7
h
8 25Right-handed alpha
Helix 53
AF8
h
31 51Right-handed alpha
Helix 54
AF9
S
13 28Right-handed alpha
Helix 55
AG1
S
31 44Right-handed alpha
Helix 56
AG2
S
101 113Right-handed alpha
Helix 57
AG3
S
127 142Right-handed alpha
Helix 58
AG4
S
175 188Right-handed alpha
Helix 59
AG5
C
7 18Right-handed alpha
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There are 3 sheets in PDB entry 6ZIQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
12 13first strand
Strand 2
b
17 18anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
147 149first strand
Strand 2
S
115 122parallel
Strand 3
S
161 166anti-parallel
Strand 4
S
169 174anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 35first strand
Strand 2
C
38 43anti-parallel
Strand 3
C
70 75anti-parallel
Strand 4
C
60 67anti-parallel
Strand 5
C
51 55anti-parallel
Strand 6
C
87 90anti-parallel
Strand 7
C
28 35anti-parallel
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