Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZIW entry

There is 1 chain in PDB entry 6ZIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 ILE 153TYR 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6ZIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
154 162Right-handed alpha
Helix 2
AA2
I
166 168Right-handed 310
Helix 3
AA3
I
203 219Right-handed alpha
Helix 4
AA4
I
248 254Right-handed alpha
Helix 5
AA5
I
255 259Right-handed 310
Helix 6
AA6
I
263 282Right-handed alpha
Helix 7
AA7
I
342 349Right-handed alpha
Helix 8
AA8
I
352 370Right-handed alpha
Helix 9
AA9
I
382 395Right-handed alpha
Helix 10
AB1
I
396 403Right-handed 310
Helix 11
AB2
I
411 426Right-handed alpha
Helix 12
AB3
I
429 433Right-handed 310
Helix 13
AB4
I
435 450Right-handed alpha
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There are 3 sheets in PDB entry 6ZIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
170 173first strand
Strand 2
I
177 184anti-parallel
Strand 3
I
187 194anti-parallel
Strand 4
I
238 242anti-parallel
Strand 5
I
229 231anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
289 290first strand
Strand 2
I
316 317anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
299 301first strand
Strand 2
I
307 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il