Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZIZ entry

There are 2 chains in PDB entry 6ZIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 170
B
 MET 1LYS 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 6ZIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 26Right-handed alpha
Helix 2
AA2
A
61 65Right-handed 310
Helix 3
AA3
A
67 75Right-handed alpha
Helix 4
AA4
A
86 105Right-handed alpha
Helix 5
AA5
A
126 138Right-handed alpha
Helix 6
AA6
A
151 170Right-handed alpha
Helix 7
AA7
B
15 26Right-handed alpha
Helix 8
AA8
B
61 65Right-handed 310
Helix 9
AA9
B
67 75Right-handed alpha
Helix 10
AB1
B
86 105Right-handed alpha
Helix 11
AB2
B
126 138Right-handed alpha
Helix 12
AB3
B
151 169Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6ZIZ.

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
111 116parallel
Strand 3
A
77 83parallel
Strand 4
A
2 9parallel
Strand 5
A
49 58parallel
Strand 6
A
37 46anti-parallel
Strand 7
B
37 46anti-parallel
Strand 8
B
49 58anti-parallel
Strand 9
B
2 9parallel
Strand 10
B
77 83parallel
Strand 11
B
111 116parallel
Strand 12
B
141 143parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il