Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZJN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZJN entry

There are 15 chains in PDB entry 6ZJN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	THR 2	ARG 438
2	PHE 3	GLU 180
3	MET 1	VAL 777
4	MET 26	ARG 409
5	MET 1	TRP 196
6	ARG 16	GLY 181
9	THR 2	LYS 181
7	ALA 3	ALA 129
A	MET 1	ARG 117
J	MET 1	GLY 160
K	MET 1	GLY 95
L	MET 1	ARG 605
M	MET 1	GLY 467
N	MET 1	GLY 427
H	THR 2	TYR 354

There are196 helices in PDB entry 6ZJN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	28	34	Right-handed alpha
Helix 2	AA2	1	38	47	Right-handed alpha
Helix 3	AA3	1	49	61	Right-handed alpha
Helix 4	AA4	1	71	78	Right-handed alpha
Helix 5	AA5	1	101	110	Right-handed alpha
Helix 6	AA6	1	110	125	Right-handed alpha
Helix 7	AA7	1	138	155	Right-handed alpha
Helix 8	AA8	1	179	183	Right-handed 310
Helix 9	AA9	1	184	194	Right-handed alpha
Helix 10	AB1	1	210	214	Right-handed 310
Helix 11	AB2	1	221	226	Right-handed alpha
Helix 12	AB3	1	226	233	Right-handed alpha
Helix 13	AB4	1	234	240	Right-handed alpha
Helix 14	AB5	1	271	279	Right-handed alpha
Helix 15	AB6	1	303	308	Right-handed alpha
Helix 16	AB7	1	336	351	Right-handed alpha
Helix 17	AB8	1	356	366	Right-handed alpha
Helix 18	AB9	1	366	375	Right-handed alpha
Helix 19	AC1	1	380	396	Right-handed alpha
Helix 20	AC2	1	401	417	Right-handed alpha
Helix 21	AC3	1	417	427	Right-handed alpha
Helix 22	AC4	2	7	17	Right-handed alpha
Helix 23	AC5	2	22	25	Right-handed 310
Helix 24	AC6	2	26	39	Right-handed alpha
Helix 25	AC7	2	42	54	Right-handed alpha
Helix 26	AC8	2	56	65	Right-handed alpha
Helix 27	AC9	2	85	91	Right-handed alpha
Helix 28	AD1	2	92	105	Right-handed alpha
Helix 29	AD2	2	146	159	Right-handed alpha
Helix 30	AD3	2	162	166	Right-handed 310
Helix 31	AD4	3	18	26	Right-handed alpha
Helix 32	AD5	3	97	113	Right-handed alpha
Helix 33	AD6	3	124	127	Right-handed 310
Helix 34	AD7	3	128	138	Right-handed alpha
Helix 35	AD8	3	178	181	Right-handed 310
Helix 36	AD9	3	185	194	Right-handed alpha
Helix 37	AE1	3	224	230	Right-handed alpha
Helix 38	AE2	3	239	241	Right-handed 310
Helix 39	AE3	3	245	249	Right-handed 310
Helix 40	AE4	3	291	297	Right-handed alpha
Helix 41	AE5	3	299	303	Right-handed 310
Helix 42	AE6	3	321	333	Right-handed alpha
Helix 43	AE7	3	350	364	Right-handed alpha
Helix 44	AE8	3	378	382	Right-handed 310
Helix 45	AE9	3	401	406	Right-handed alpha
Helix 46	AF1	3	408	418	Right-handed alpha
Helix 47	AF2	3	456	462	Right-handed 310
Helix 48	AF3	3	472	482	Right-handed alpha
Helix 49	AF4	3	487	500	Right-handed alpha
Helix 50	AF5	3	508	513	Right-handed alpha
Helix 51	AF6	3	514	528	Right-handed alpha
Helix 52	AF7	3	540	547	Right-handed alpha
Helix 53	AF8	3	573	578	Right-handed alpha
Helix 54	AF9	3	591	596	Right-handed alpha
Helix 55	AG1	3	606	610	Right-handed 310
Helix 56	AG2	3	636	647	Right-handed alpha
Helix 57	AG3	3	656	667	Right-handed alpha
Helix 58	AG4	3	700	704	Right-handed 310
Helix 59	AG5	3	707	712	Right-handed alpha
Helix 60	AG6	3	719	726	Right-handed alpha
Helix 61	AG7	4	65	71	Right-handed alpha
Helix 62	AG8	4	74	79	Right-handed alpha
Helix 63	AG9	4	80	85	Right-handed 310
Helix 64	AH1	4	90	106	Right-handed alpha
Helix 65	AH2	4	110	140	Right-handed alpha
Helix 66	AH3	4	144	165	Right-handed alpha
Helix 67	AH4	4	185	210	Right-handed alpha
Helix 68	AH5	4	211	219	Right-handed alpha
Helix 69	AH6	4	225	232	Right-handed alpha
Helix 70	AH7	4	238	243	Right-handed 310
Helix 71	AH8	4	247	252	Right-handed alpha
Helix 72	AH9	4	256	260	Right-handed 310
Helix 73	AI1	4	271	296	Right-handed alpha
Helix 74	AI2	4	320	333	Right-handed alpha
Helix 75	AI3	4	372	377	Right-handed alpha
Helix 76	AI4	4	380	385	Right-handed alpha
Helix 77	AI5	4	391	401	Right-handed alpha
Helix 78	AI6	4	403	409	Right-handed alpha
Helix 79	AI7	5	3	13	Right-handed alpha
Helix 80	AI8	5	33	44	Right-handed alpha
Helix 81	AI9	5	110	123	Right-handed alpha
Helix 82	AJ1	5	166	170	Right-handed 310
Helix 83	AJ2	5	186	191	Right-handed 310
Helix 84	AJ3	6	21	35	Right-handed alpha
Helix 85	AJ4	6	45	55	Right-handed alpha
Helix 86	AJ5	6	60	64	Right-handed 310
Helix 87	AJ6	6	88	98	Right-handed alpha
Helix 88	AJ7	6	109	114	Right-handed alpha
Helix 89	AJ8	6	126	130	Right-handed 310
Helix 90	AJ9	6	143	159	Right-handed alpha
Helix 91	AK1	9	3	19	Right-handed alpha
Helix 92	AK2	9	57	63	Right-handed alpha
Helix 93	AK3	9	102	108	Right-handed alpha
Helix 94	AK4	9	125	128	Right-handed 310
Helix 95	AK5	9	134	136	Right-handed 310
Helix 96	AK6	9	143	153	Right-handed alpha
Helix 97	AK7	7	4	28	Right-handed alpha
Helix 98	AK8	7	37	42	Right-handed alpha
Helix 99	AK9	7	111	127	Right-handed alpha
Helix 100	AL1	A	4	31	Right-handed alpha
Helix 101	AL2	A	59	84	Right-handed alpha
Helix 102	AL3	A	88	114	Right-handed alpha
Helix 103	AL4	J	2	22	Right-handed alpha
Helix 104	AL5	J	24	46	Right-handed alpha
Helix 105	AL6	J	48	59	Right-handed alpha
Helix 106	AL7	J	62	74	Right-handed alpha
Helix 107	AL8	J	88	110	Right-handed alpha
Helix 108	AL9	J	127	132	Right-handed alpha
Helix 109	AM1	J	135	158	Right-handed alpha
Helix 110	AM2	K	2	21	Right-handed alpha
Helix 111	AM3	K	23	50	Right-handed alpha
Helix 112	AM4	K	51	79	Right-handed alpha
Helix 113	AM5	L	2	20	Right-handed alpha
Helix 114	AM6	L	27	50	Right-handed alpha
Helix 115	AM7	L	70	95	Right-handed alpha
Helix 116	AM8	L	100	120	Right-handed alpha
Helix 117	AM9	L	123	143	Right-handed alpha
Helix 118	AN1	L	149	179	Right-handed alpha
Helix 119	AN2	L	184	193	Right-handed alpha
Helix 120	AN3	L	198	217	Right-handed alpha
Helix 121	AN4	L	224	229	Right-handed alpha
Helix 122	AN5	L	233	242	Right-handed alpha
Helix 123	AN6	L	247	256	Right-handed alpha
Helix 124	AN7	L	256	261	Right-handed alpha
Helix 125	AN8	L	263	284	Right-handed alpha
Helix 126	AN9	L	290	310	Right-handed alpha
Helix 127	AO1	L	314	343	Right-handed alpha
Helix 128	AO2	L	361	375	Right-handed alpha
Helix 129	AO3	L	379	395	Right-handed alpha
Helix 130	AO4	L	399	426	Right-handed alpha
Helix 131	AO5	L	439	456	Right-handed alpha
Helix 132	AO6	L	457	460	Right-handed 310
Helix 133	AO7	L	469	474	Right-handed alpha
Helix 134	AO8	L	488	515	Right-handed alpha
Helix 135	AO9	L	518	530	Right-handed alpha
Helix 136	AP1	L	533	542	Right-handed alpha
Helix 137	AP2	L	542	580	Right-handed alpha
Helix 138	AP3	L	585	605	Right-handed alpha
Helix 139	AP4	M	2	18	Right-handed alpha
Helix 140	AP5	M	22	43	Right-handed alpha
Helix 141	AP6	M	57	60	Right-handed 310
Helix 142	AP7	M	70	89	Right-handed alpha
Helix 143	AP8	M	95	112	Right-handed alpha
Helix 144	AP9	M	114	125	Right-handed alpha
Helix 145	AQ1	M	125	135	Right-handed alpha
Helix 146	AQ2	M	140	169	Right-handed alpha
Helix 147	AQ3	M	176	183	Right-handed alpha
Helix 148	AQ4	M	189	203	Right-handed alpha
Helix 149	AQ5	M	207	212	Right-handed 310
Helix 150	AQ6	M	213	221	Right-handed alpha
Helix 151	AQ7	M	225	233	Right-handed alpha
Helix 152	AQ8	M	236	244	Right-handed alpha
Helix 153	AQ9	M	245	248	Right-handed 310
Helix 154	AR1	M	249	278	Right-handed alpha
Helix 155	AR2	M	280	302	Right-handed alpha
Helix 156	AR3	M	304	337	Right-handed alpha
Helix 157	AR4	M	353	366	Right-handed alpha
Helix 158	AR5	M	372	388	Right-handed alpha
Helix 159	AR6	M	388	396	Right-handed alpha
Helix 160	AR7	M	398	414	Right-handed alpha
Helix 161	AR8	M	426	446	Right-handed alpha
Helix 162	AR9	M	447	450	Right-handed 310
Helix 163	AS1	M	453	464	Right-handed alpha
Helix 164	AS2	N	2	17	Right-handed alpha
Helix 165	AS3	N	21	42	Right-handed alpha
Helix 166	AS4	N	56	77	Right-handed alpha
Helix 167	AS5	N	82	100	Right-handed alpha
Helix 168	AS6	N	103	121	Right-handed alpha
Helix 169	AS7	N	127	158	Right-handed alpha
Helix 170	AS8	N	169	188	Right-handed alpha
Helix 171	AS9	N	195	203	Right-handed alpha
Helix 172	AT1	N	204	226	Right-handed alpha
Helix 173	AT2	N	229	251	Right-handed alpha
Helix 174	AT3	N	253	273	Right-handed alpha
Helix 175	AT4	N	279	303	Right-handed alpha
Helix 176	AT5	N	308	313	Right-handed 310
Helix 177	AT6	N	314	319	Right-handed alpha
Helix 178	AT7	N	319	335	Right-handed alpha
Helix 179	AT8	N	340	356	Right-handed alpha
Helix 180	AT9	N	358	371	Right-handed alpha
Helix 181	AU1	N	371	380	Right-handed alpha
Helix 182	AU2	N	381	384	Right-handed 310
Helix 183	AU3	N	395	415	Right-handed alpha
Helix 184	AU4	N	419	423	Right-handed 310
Helix 185	AU5	H	9	43	Right-handed alpha
Helix 186	AU6	H	57	67	Right-handed alpha
Helix 187	AU7	H	78	95	Right-handed alpha
Helix 188	AU8	H	120	144	Right-handed alpha
Helix 189	AU9	H	145	178	Right-handed alpha
Helix 190	AV1	H	181	192	Right-handed alpha
Helix 191	AV2	H	199	211	Right-handed alpha
Helix 192	AV3	H	238	264	Right-handed alpha
Helix 193	AV4	H	276	297	Right-handed alpha
Helix 194	AV5	H	302	312	Right-handed alpha
Helix 195	AV6	H	312	331	Right-handed alpha
Helix 196	AV7	H	334	351	Right-handed alpha

There are 27 sheets in PDB entry 6ZJN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	171	175	first strand
Strand 2	1	130	134	parallel
Strand 3	1	88	93	parallel
Strand 4	1	216	220	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	249	254	first strand
Strand 2	1	262	267	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	300	301	first strand
Strand 2	1	287	291	anti-parallel
Strand 3	1	329	332	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	117	122	first strand
Strand 2	2	78	83	parallel
Strand 3	2	133	136	anti-parallel
Strand 4	2	139	143	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	9	11	first strand
Strand 2	3	4	6	anti-parallel
Strand 3	3	91	94	parallel
Strand 4	3	49	53	anti-parallel
Strand 5	3	80	81	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	168	169	first strand
Strand 2	3	174	176	anti-parallel
Strand 3	3	235	237	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	201	202	first strand
Strand 2	3	211	212	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	250	256	first strand
Strand 2	3	263	270	anti-parallel
Strand 3	3	273	279	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	317	319	first strand
Strand 2	3	310	312	anti-parallel
Strand 3	3	600	603	anti-parallel
Strand 4	3	582	587	parallel
Strand 5	3	565	568	parallel
Strand 6	3	343	345	parallel
Strand 7	3	369	371	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	464	467	first strand
Strand 2	3	448	452	parallel
Strand 3	3	395	399	parallel
Strand 4	3	503	507	parallel
Strand 5	3	532	534	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	612	615	first strand
Strand 2	3	621	624	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	734	738	first strand
Strand 2	3	741	749	anti-parallel
Strand 3	3	714	718	parallel
Strand 4	3	758	762	anti-parallel
Strand 5	3	692	696	parallel
Strand 6	3	770	771	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	27	30	first strand
Strand 2	4	42	47	anti-parallel
Strand 3	4	52	58	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	339	342	first strand
Strand 2	4	351	360	anti-parallel
Strand 3	4	345	348	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	339	342	first strand
Strand 2	4	351	360	anti-parallel
Strand 3	4	365	371	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	17	20	first strand
Strand 2	5	24	27	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	48	56	first strand
Strand 2	5	68	75	anti-parallel
Strand 3	5	88	94	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	100	102	first strand
Strand 2	5	125	127	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	157	159	first strand
Strand 2	5	163	165	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	38	42	first strand
Strand 2	6	77	81	parallel
Strand 3	6	104	108	parallel
Strand 4	6	135	137	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	9	31	32	first strand
Strand 2	9	161	162	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	9	42	43	first strand
Strand 2	9	113	114	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	9	68	73	first strand
Strand 2	9	87	94	anti-parallel
Strand 3	9	130	132	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	31	36	first strand
Strand 2	7	54	60	anti-parallel
Strand 3	7	66	72	anti-parallel
Strand 4	7	82	86	anti-parallel
Strand 5	7	91	98	anti-parallel
Strand 6	7	102	105	anti-parallel
Strand 7	7	108	109	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	57	first strand
Strand 2	L	65	69	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	51	56	first strand
Strand 2	M	61	65	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	48	49	first strand
Strand 2	N	54	55	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZJN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZJN