Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZJO entry

There are 2 chains in PDB entry 6ZJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 286
B
 ARG -3ASN 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6ZJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 103Right-handed alpha
Helix 2
AA2
A
113 117Right-handed 310
Helix 3
AA3
A
118 136Right-handed alpha
Helix 4
AA4
A
147 155Right-handed alpha
Helix 5
AA5
A
169 175Right-handed alpha
Helix 6
AA6
A
227 229Right-handed 310
Helix 7
AA7
A
230 235Right-handed alpha
Helix 8
AA8
A
235 242Right-handed alpha
Helix 9
AA9
A
243 245Right-handed 310
Helix 10
AB1
A
258 266Right-handed alpha
Helix 11
AB2
A
270 286Right-handed alpha
Helix 12
AB3
B
89 103Right-handed alpha
Helix 13
AB4
B
113 117Right-handed 310
Helix 14
AB5
B
118 136Right-handed alpha
Helix 15
AB6
B
147 154Right-handed alpha
Helix 16
AB7
B
170 175Right-handed alpha
Helix 17
AB8
B
230 234Right-handed 310
Helix 18
AB9
B
235 242Right-handed alpha
Helix 19
AC1
B
243 245Right-handed 310
Helix 20
AC2
B
258 266Right-handed alpha
Helix 21
AC3
B
270 285Right-handed alpha
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There are 6 sheets in PDB entry 6ZJO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 10first strand
Strand 2
A
13 18anti-parallel
Strand 3
A
21 27anti-parallel
Strand 4
A
53 59parallel
Strand 5
A
43 49anti-parallel
Strand 6
A
2 10anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
71 72anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
107 112parallel
Strand 3
A
76 82parallel
Strand 4
A
158 163parallel
Strand 5
A
210 213parallel
Strand 6
A
204 207anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 10first strand
Strand 2
B
13 18anti-parallel
Strand 3
B
21 26anti-parallel
Strand 4
B
53 59parallel
Strand 5
B
43 49anti-parallel
Strand 6
B
1 10anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
71 72anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 141first strand
Strand 2
B
107 112parallel
Strand 3
B
76 82parallel
Strand 4
B
158 163parallel
Strand 5
B
210 213parallel
Strand 6
B
205 207anti-parallel
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