Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZK5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZK5 entry

There are 2 chains in PDB entry 6ZK5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 0PRO 315
B
 ASN 0PRO 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6ZK5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
39 54Right-handed alpha
Helix 3
AA3
A
77 82Right-handed alpha
Helix 4
AA4
A
102 114Right-handed alpha
Helix 5
AA5
A
126 136Right-handed alpha
Helix 6
AA6
A
138 143Right-handed alpha
Helix 7
AA7
A
164 170Right-handed alpha
Helix 8
AA8
A
170 179Right-handed alpha
Helix 9
AA9
A
188 193Right-handed alpha
Helix 10
AB1
A
199 207Right-handed alpha
Helix 11
AB2
A
212 232Right-handed alpha
Helix 12
AB3
A
238 249Right-handed alpha
Helix 13
AB4
A
300 314Right-handed alpha
Helix 14
AB5
B
10 23Right-handed alpha
Helix 15
AB6
B
39 54Right-handed alpha
Helix 16
AB7
B
77 82Right-handed alpha
Helix 17
AB8
B
102 114Right-handed alpha
Helix 18
AB9
B
126 136Right-handed alpha
Helix 19
AC1
B
138 143Right-handed alpha
Helix 20
AC2
B
164 170Right-handed alpha
Helix 21
AC3
B
170 179Right-handed alpha
Helix 22
AC4
B
188 193Right-handed alpha
Helix 23
AC5
B
199 207Right-handed alpha
Helix 24
AC6
B
212 232Right-handed alpha
Helix 25
AC7
B
238 249Right-handed alpha
Helix 26
AC8
B
300 314Right-handed alpha
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There are 5 sheets in PDB entry 6ZK5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
26 33parallel
Strand 3
A
1 7parallel
Strand 4
A
118 122parallel
Strand 5
A
145 149parallel
Strand 6
A
184 187parallel
Strand 7
A
293 299parallel
Strand 8
A
253 262anti-parallel
Strand 9
A
272 275anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
235 237anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
26 33parallel
Strand 3
B
1 7parallel
Strand 4
B
118 122parallel
Strand 5
B
145 149parallel
Strand 6
B
184 187parallel
Strand 7
B
293 299parallel
Strand 8
B
253 258anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 198first strand
Strand 2
B
235 237anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 262first strand
Strand 2
B
272 274anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il