Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZK8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZK8 entry

There are 2 chains in PDB entry 6ZK8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 410
O
 MET 1GLU 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6ZK8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 71Right-handed alpha
Helix 2
AA2
A
86 91Right-handed alpha
Helix 3
AA3
A
92 100Right-handed alpha
Helix 4
AA4
A
108 119Right-handed alpha
Helix 5
AA5
A
120 123Right-handed 310
Helix 6
AA6
A
183 187Right-handed 310
Helix 7
AA7
A
188 204Right-handed alpha
Helix 8
AA8
A
207 221Right-handed alpha
Helix 9
AA9
A
223 227Right-handed 310
Helix 10
AB1
A
240 253Right-handed alpha
Helix 11
AB2
A
269 284Right-handed alpha
Helix 12
AB3
A
298 308Right-handed alpha
Helix 13
AB4
A
325 338Right-handed alpha
Helix 14
AB5
A
339 343Right-handed 310
Helix 15
AB6
A
359 371Right-handed alpha
Helix 16
AB7
A
386 407Right-handed alpha
Helix 17
AB8
O
56 71Right-handed alpha
Helix 18
AB9
O
86 91Right-handed alpha
Helix 19
AC1
O
92 100Right-handed alpha
Helix 20
AC2
O
108 119Right-handed alpha
Helix 21
AC3
O
120 123Right-handed 310
Helix 22
AC4
O
183 187Right-handed 310
Helix 23
AC5
O
188 204Right-handed alpha
Helix 24
AC6
O
207 221Right-handed alpha
Helix 25
AC7
O
223 227Right-handed 310
Helix 26
AC8
O
240 253Right-handed alpha
Helix 27
AC9
O
269 284Right-handed alpha
Helix 28
AD1
O
298 308Right-handed alpha
Helix 29
AD2
O
325 338Right-handed alpha
Helix 30
AD3
O
339 343Right-handed 310
Helix 31
AD4
O
359 371Right-handed alpha
Helix 32
AD5
O
386 407Right-handed alpha
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There are 12 sheets in PDB entry 6ZK8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
38 41anti-parallel
Strand 4
A
46 49anti-parallel
Strand 5
A
79 81parallel
Strand 6
A
105 107parallel
Strand 7
A
127 129parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
33 35anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
28 29anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 137first strand
Strand 2
A
142 147anti-parallel
Strand 3
A
157 161anti-parallel
Strand 4
A
166 170anti-parallel
Strand 5
A
229 232parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 293first strand
Strand 2
A
257 264parallel
Strand 3
A
309 315parallel
Strand 4
A
347 354parallel
Strand 5
A
374 382parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 319first strand
Strand 2
A
322 323anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
6 9first strand
Strand 2
O
12 14anti-parallel
Strand 3
O
38 41anti-parallel
Strand 4
O
46 49anti-parallel
Strand 5
O
79 81parallel
Strand 6
O
105 107parallel
Strand 7
O
127 129parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
17 19first strand
Strand 2
O
33 35anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
24 25first strand
Strand 2
O
28 29anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
135 137first strand
Strand 2
O
142 147anti-parallel
Strand 3
O
157 161anti-parallel
Strand 4
O
166 170anti-parallel
Strand 5
O
229 232parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
288 293first strand
Strand 2
O
257 264parallel
Strand 3
O
309 315parallel
Strand 4
O
347 354parallel
Strand 5
O
374 382parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
318 319first strand
Strand 2
O
322 323anti-parallel
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