Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZL0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZL0 entry

There are 4 chains in PDB entry 6ZL0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 379	GLY 745
B	VAL 2	ALA 292
C	GLU 379	GLY 745
D	VAL 2	ALA 292

There are 46 helices in PDB entry 6ZL0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	388	390	Right-handed 310
Helix 2	AA2	A	415	425	Right-handed alpha
Helix 3	AA3	A	427	437	Right-handed alpha
Helix 4	AA4	A	440	457	Right-handed alpha
Helix 5	AA5	A	457	467	Right-handed alpha
Helix 6	AA6	A	508	520	Right-handed alpha
Helix 7	AA7	A	522	532	Right-handed alpha
Helix 8	AA8	A	535	544	Right-handed alpha
Helix 9	AA9	A	550	555	Right-handed alpha
Helix 10	AB1	A	555	561	Right-handed alpha
Helix 11	AB2	A	567	578	Right-handed alpha
Helix 12	AB3	A	581	588	Right-handed alpha
Helix 13	AB4	A	589	591	Right-handed 310
Helix 14	AB5	A	592	604	Right-handed alpha
Helix 15	AB6	A	607	624	Right-handed alpha
Helix 16	AB7	A	627	639	Right-handed alpha
Helix 17	AB8	A	640	651	Right-handed alpha
Helix 18	AB9	A	651	661	Right-handed alpha
Helix 19	AC1	A	665	686	Right-handed alpha
Helix 20	AC2	A	696	712	Right-handed alpha
Helix 21	AC3	A	715	726	Right-handed alpha
Helix 22	AC4	A	730	745	Right-handed alpha
Helix 23	AC5	B	63	67	Right-handed 310
Helix 24	AC6	C	388	390	Right-handed 310
Helix 25	AC7	C	415	425	Right-handed alpha
Helix 26	AC8	C	427	437	Right-handed alpha
Helix 27	AC9	C	440	457	Right-handed alpha
Helix 28	AD1	C	457	467	Right-handed alpha
Helix 29	AD2	C	508	520	Right-handed alpha
Helix 30	AD3	C	522	532	Right-handed alpha
Helix 31	AD4	C	535	544	Right-handed alpha
Helix 32	AD5	C	550	555	Right-handed alpha
Helix 33	AD6	C	555	561	Right-handed alpha
Helix 34	AD7	C	567	578	Right-handed alpha
Helix 35	AD8	C	581	588	Right-handed alpha
Helix 36	AD9	C	589	591	Right-handed 310
Helix 37	AE1	C	592	604	Right-handed alpha
Helix 38	AE2	C	607	624	Right-handed alpha
Helix 39	AE3	C	627	639	Right-handed alpha
Helix 40	AE4	C	640	651	Right-handed alpha
Helix 41	AE5	C	651	661	Right-handed alpha
Helix 42	AE6	C	665	686	Right-handed alpha
Helix 43	AE7	C	696	712	Right-handed alpha
Helix 44	AE8	C	715	726	Right-handed alpha
Helix 45	AE9	C	730	745	Right-handed alpha
Helix 46	AF1	D	63	67	Right-handed 310

There are 14 sheets in PDB entry 6ZL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	385	387	first strand
Strand 2	A	391	395	anti-parallel
Strand 3	A	402	405	anti-parallel
Strand 4	B	3	4	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	15	first strand
Strand 2	B	23	28	anti-parallel
Strand 3	B	32	38	anti-parallel
Strand 4	B	43	50	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	61	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	79	85	anti-parallel
Strand 4	B	88	95	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	107	first strand
Strand 2	B	116	120	anti-parallel
Strand 3	B	124	128	anti-parallel
Strand 4	B	139	142	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	153	first strand
Strand 2	B	172	177	anti-parallel
Strand 3	B	182	188	anti-parallel
Strand 4	B	193	200	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	212	first strand
Strand 2	B	220	226	anti-parallel
Strand 3	B	231	236	anti-parallel
Strand 4	B	244	247	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	262	first strand
Strand 2	B	269	272	anti-parallel
Strand 3	B	278	283	anti-parallel
Strand 4	B	289	291	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	385	387	first strand
Strand 2	C	391	395	anti-parallel
Strand 3	C	402	405	anti-parallel
Strand 4	D	3	4	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	15	first strand
Strand 2	D	23	28	anti-parallel
Strand 3	D	32	38	anti-parallel
Strand 4	D	43	50	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	61	first strand
Strand 2	D	69	74	anti-parallel
Strand 3	D	79	85	anti-parallel
Strand 4	D	88	95	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	107	first strand
Strand 2	D	116	120	anti-parallel
Strand 3	D	124	128	anti-parallel
Strand 4	D	139	142	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	153	first strand
Strand 2	D	172	177	anti-parallel
Strand 3	D	182	188	anti-parallel
Strand 4	D	193	200	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	212	first strand
Strand 2	D	220	226	anti-parallel
Strand 3	D	231	236	anti-parallel
Strand 4	D	244	247	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	262	first strand
Strand 2	D	269	272	anti-parallel
Strand 3	D	278	283	anti-parallel
Strand 4	D	289	291	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZL0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZL0