Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZLL entry

There are 4 chains in PDB entry 6ZLL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 321
B	MET 1	LYS 315
C	MET 1	LYS 315
D	MET 1	SER 321

There are 60 helices in PDB entry 6ZLL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	22	Right-handed alpha
Helix 2	AA2	A	39	48	Right-handed alpha
Helix 3	AA3	A	49	53	Right-handed 310
Helix 4	AA4	A	62	66	Right-handed 310
Helix 5	AA5	A	67	73	Right-handed alpha
Helix 6	AA6	A	91	94	Right-handed 310
Helix 7	AA7	A	95	103	Right-handed alpha
Helix 8	AA8	A	103	114	Right-handed alpha
Helix 9	AA9	A	128	130	Right-handed 310
Helix 10	AB1	A	147	168	Right-handed alpha
Helix 11	AB2	A	188	199	Right-handed alpha
Helix 12	AB3	A	218	231	Right-handed alpha
Helix 13	AB4	A	250	262	Right-handed alpha
Helix 14	AB5	A	284	292	Right-handed alpha
Helix 15	AB6	A	298	316	Right-handed alpha
Helix 16	AB7	B	10	22	Right-handed alpha
Helix 17	AB8	B	39	42	Right-handed 310
Helix 18	AB9	B	43	53	Right-handed alpha
Helix 19	AC1	B	62	66	Right-handed 310
Helix 20	AC2	B	67	73	Right-handed alpha
Helix 21	AC3	B	91	94	Right-handed 310
Helix 22	AC4	B	95	103	Right-handed alpha
Helix 23	AC5	B	103	114	Right-handed alpha
Helix 24	AC6	B	128	130	Right-handed 310
Helix 25	AC7	B	147	168	Right-handed alpha
Helix 26	AC8	B	188	200	Right-handed alpha
Helix 27	AC9	B	218	231	Right-handed alpha
Helix 28	AD1	B	250	262	Right-handed alpha
Helix 29	AD2	B	284	292	Right-handed alpha
Helix 30	AD3	B	298	315	Right-handed alpha
Helix 31	AD4	C	10	22	Right-handed alpha
Helix 32	AD5	C	40	52	Right-handed alpha
Helix 33	AD6	C	62	66	Right-handed 310
Helix 34	AD7	C	67	73	Right-handed alpha
Helix 35	AD8	C	86	90	Right-handed 310
Helix 36	AD9	C	91	93	Right-handed 310
Helix 37	AE1	C	94	103	Right-handed alpha
Helix 38	AE2	C	103	114	Right-handed alpha
Helix 39	AE3	C	128	131	Right-handed 310
Helix 40	AE4	C	147	168	Right-handed alpha
Helix 41	AE5	C	188	199	Right-handed alpha
Helix 42	AE6	C	218	231	Right-handed alpha
Helix 43	AE7	C	250	262	Right-handed alpha
Helix 44	AE8	C	284	292	Right-handed alpha
Helix 45	AE9	C	298	315	Right-handed alpha
Helix 46	AF1	D	10	22	Right-handed alpha
Helix 47	AF2	D	39	45	Right-handed alpha
Helix 48	AF3	D	47	52	Right-handed alpha
Helix 49	AF4	D	62	66	Right-handed 310
Helix 50	AF5	D	67	72	Right-handed alpha
Helix 51	AF6	D	91	94	Right-handed 310
Helix 52	AF7	D	95	103	Right-handed alpha
Helix 53	AF8	D	103	114	Right-handed alpha
Helix 54	AF9	D	128	130	Right-handed 310
Helix 55	AG1	D	147	168	Right-handed alpha
Helix 56	AG2	D	188	199	Right-handed alpha
Helix 57	AG3	D	218	231	Right-handed alpha
Helix 58	AG4	D	250	262	Right-handed alpha
Helix 59	AG5	D	284	292	Right-handed alpha
Helix 60	AG6	D	298	316	Right-handed alpha

There are 15 sheets in PDB entry 6ZLL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	59	first strand
Strand 2	A	27	31	parallel
Strand 3	A	2	6	parallel
Strand 4	A	77	80	parallel
Strand 5	A	120	126	parallel
Strand 6	A	171	176	parallel
Strand 7	A	239	242	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	180	first strand
Strand 2	A	212	217	parallel
Strand 3	A	246	249	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	206	first strand
Strand 2	A	267	270	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	59	first strand
Strand 2	B	27	31	parallel
Strand 3	B	2	6	parallel
Strand 4	B	77	80	parallel
Strand 5	B	120	126	parallel
Strand 6	B	171	176	parallel
Strand 7	B	239	242	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	180	first strand
Strand 2	B	216	217	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	206	first strand
Strand 2	B	267	270	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	213	first strand
Strand 2	B	248	249	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	59	first strand
Strand 2	C	27	31	parallel
Strand 3	C	2	6	parallel
Strand 4	C	77	80	parallel
Strand 5	C	120	126	parallel
Strand 6	C	171	176	parallel
Strand 7	C	239	242	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	180	first strand
Strand 2	C	216	217	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	206	first strand
Strand 2	C	267	270	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	213	first strand
Strand 2	C	248	249	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	27	31	parallel
Strand 3	D	2	6	parallel
Strand 4	D	77	80	parallel
Strand 5	D	120	126	parallel
Strand 6	D	171	176	parallel
Strand 7	D	239	242	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	179	180	first strand
Strand 2	D	216	217	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	206	first strand
Strand 2	D	267	270	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	212	214	first strand
Strand 2	D	247	249	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZLL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLL