Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZLT entry

There are 2 chains in PDB entry 6ZLT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 1	TRP 552
B	VAL 84	PHE 1016

There are 36 helices in PDB entry 6ZLT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	5	Right-handed 310
Helix 2	AA2	A	17	21	Right-handed 310
Helix 3	AA3	A	27	34	Right-handed alpha
Helix 4	AA4	A	69	77	Right-handed alpha
Helix 5	AA5	A	84	108	Right-handed alpha
Helix 6	AA6	A	109	111	Right-handed 310
Helix 7	AA7	A	118	141	Right-handed alpha
Helix 8	AA8	A	153	157	Right-handed 310
Helix 9	AA9	A	166	185	Right-handed alpha
Helix 10	AB1	A	196	213	Right-handed alpha
Helix 11	AB2	A	229	236	Right-handed alpha
Helix 12	AB3	A	238	244	Right-handed alpha
Helix 13	AB4	A	285	289	Right-handed 310
Helix 14	AB5	A	305	313	Right-handed alpha
Helix 15	AB6	A	339	344	Right-handed alpha
Helix 16	AB7	A	406	422	Right-handed alpha
Helix 17	AB8	A	426	442	Right-handed alpha
Helix 18	AB9	A	447	451	Right-handed 310
Helix 19	AC1	A	469	485	Right-handed alpha
Helix 20	AC2	A	491	499	Right-handed alpha
Helix 21	AC3	A	501	513	Right-handed alpha
Helix 22	AC4	A	517	521	Right-handed 310
Helix 23	AC5	A	535	542	Right-handed alpha
Helix 24	AC6	B	93	97	Right-handed 310
Helix 25	AC7	B	108	113	Right-handed alpha
Helix 26	AC8	B	233	249	Right-handed alpha
Helix 27	AC9	B	377	384	Right-handed alpha
Helix 28	AD1	B	409	417	Right-handed alpha
Helix 29	AD2	B	604	608	Right-handed 310
Helix 30	AD3	B	725	729	Right-handed 310
Helix 31	AD4	B	781	786	Right-handed alpha
Helix 32	AD5	B	817	822	Right-handed alpha
Helix 33	AD6	B	890	896	Right-handed alpha
Helix 34	AD7	B	910	914	Right-handed 310
Helix 35	AD8	B	939	943	Right-handed 310
Helix 36	AD9	B	961	967	Right-handed alpha

There are 14 sheets in PDB entry 6ZLT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	402	405	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	87	first strand
Strand 2	B	90	92	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	104	first strand
Strand 2	B	178	182	anti-parallel
Strand 3	B	199	203	anti-parallel
Strand 4	B	156	159	parallel
Strand 5	B	162	164	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	140	144	anti-parallel

Back to list of sheets
Back to top of page

There are 20 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	338	342	first strand
Strand 2	B	327	331	anti-parallel
Strand 3	B	303	308	anti-parallel
Strand 4	B	215	223	anti-parallel
Strand 5	B	1007	1015	anti-parallel
Strand 6	B	975	980	anti-parallel
Strand 7	B	953	957	anti-parallel
Strand 8	B	873	880	anti-parallel
Strand 9	B	861	868	anti-parallel
Strand 10	B	760	769	anti-parallel
Strand 11	B	741	756	anti-parallel
Strand 12	B	706	715	anti-parallel
Strand 13	B	686	697	anti-parallel
Strand 14	B	617	627	anti-parallel
Strand 15	B	590	600	anti-parallel
Strand 16	B	569	580	anti-parallel
Strand 17	B	552	560	anti-parallel
Strand 18	B	501	514	anti-parallel
Strand 19	B	485	498	anti-parallel
Strand 20	B	441	443	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	224	first strand
Strand 2	B	1006	1009	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	313	first strand
Strand 2	B	319	324	anti-parallel
Strand 3	B	345	351	anti-parallel
Strand 4	B	358	364	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	368	first strand
Strand 2	B	423	427	anti-parallel
Strand 3	B	450	455	anti-parallel
Strand 4	B	480	485	anti-parallel
Strand 5	B	517	519	anti-parallel
Strand 6	B	547	549	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	458	460	first strand
Strand 2	B	475	477	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	722	first strand
Strand 2	B	734	737	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	879	881	first strand
Strand 2	B	948	950	anti-parallel
Strand 3	B	984	986	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	265	first strand
Strand 2	B	271	278	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	740	744	first strand
Strand 2	B	772	777	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	806	first strand
Strand 2	B	850	853	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZLT

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLT