Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZLV entry

There are 4 chains in PDB entry 6ZLV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 79	PHE 254
B	ALA 79	PHE 254
C	ALA 79	PHE 254
D	ALA 79	PHE 254

There are 12 helices in PDB entry 6ZLV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	79	94	Right-handed alpha
Helix 2	AA2	A	124	128	Right-handed 310
Helix 3	AA3	A	243	247	Right-handed 310
Helix 4	AA4	B	80	94	Right-handed alpha
Helix 5	AA5	B	124	128	Right-handed 310
Helix 6	AA6	B	243	247	Right-handed 310
Helix 7	AA7	C	80	94	Right-handed alpha
Helix 8	AA8	C	124	128	Right-handed 310
Helix 9	AA9	C	243	247	Right-handed 310
Helix 10	AB1	D	80	94	Right-handed alpha
Helix 11	AB2	D	124	128	Right-handed 310
Helix 12	AB3	D	243	247	Right-handed 310

There are 8 sheets in PDB entry 6ZLV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	110	first strand
Strand 2	A	118	121	anti-parallel
Strand 3	A	153	157	anti-parallel
Strand 4	A	141	148	anti-parallel
Strand 5	A	134	136	anti-parallel
Strand 6	A	249	253	anti-parallel
Strand 7	A	102	110	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	175	180	anti-parallel
Strand 3	A	187	190	anti-parallel
Strand 4	A	235	240	anti-parallel
Strand 5	A	218	226	anti-parallel
Strand 6	A	203	206	anti-parallel
Strand 7	A	164	169	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	110	first strand
Strand 2	B	118	121	anti-parallel
Strand 3	B	153	157	anti-parallel
Strand 4	B	141	148	anti-parallel
Strand 5	B	134	136	anti-parallel
Strand 6	B	249	253	anti-parallel
Strand 7	B	102	110	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	169	first strand
Strand 2	B	175	180	anti-parallel
Strand 3	B	187	190	anti-parallel
Strand 4	B	235	240	anti-parallel
Strand 5	B	218	226	anti-parallel
Strand 6	B	203	206	anti-parallel
Strand 7	B	164	169	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	110	first strand
Strand 2	C	118	121	anti-parallel
Strand 3	C	153	157	anti-parallel
Strand 4	C	141	148	anti-parallel
Strand 5	C	134	136	anti-parallel
Strand 6	C	249	253	anti-parallel
Strand 7	C	102	110	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	169	first strand
Strand 2	C	175	180	anti-parallel
Strand 3	C	187	190	anti-parallel
Strand 4	C	235	240	anti-parallel
Strand 5	C	218	226	anti-parallel
Strand 6	C	203	206	anti-parallel
Strand 7	C	164	169	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	110	first strand
Strand 2	D	118	121	anti-parallel
Strand 3	D	153	157	anti-parallel
Strand 4	D	141	148	anti-parallel
Strand 5	D	134	136	anti-parallel
Strand 6	D	249	253	anti-parallel
Strand 7	D	102	110	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	169	first strand
Strand 2	D	175	180	anti-parallel
Strand 3	D	187	190	anti-parallel
Strand 4	D	235	240	anti-parallel
Strand 5	D	218	226	anti-parallel
Strand 6	D	203	206	anti-parallel
Strand 7	D	164	169	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZLV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZLV