Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZMM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZMM entry

There are 2 chains in PDB entry 6ZMM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 32PRO 316
B
 VAL 32PRO 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6ZMM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 73Right-handed alpha
Helix 2
AA2
A
73 78Right-handed alpha
Helix 3
AA3
A
79 81Right-handed 310
Helix 4
AA4
A
82 89Right-handed alpha
Helix 5
AA5
A
114 121Right-handed alpha
Helix 6
AA6
A
121 129Right-handed alpha
Helix 7
AA7
A
140 153Right-handed alpha
Helix 8
AA8
A
186 196Right-handed alpha
Helix 9
AA9
A
208 218Right-handed alpha
Helix 10
AB1
A
220 233Right-handed alpha
Helix 11
AB2
A
265 275Right-handed alpha
Helix 12
AB3
A
292 297Right-handed alpha
Helix 13
AB4
A
297 312Right-handed alpha
Helix 14
AB5
B
68 73Right-handed alpha
Helix 15
AB6
B
73 78Right-handed alpha
Helix 16
AB7
B
79 89Right-handed alpha
Helix 17
AB8
B
114 120Right-handed alpha
Helix 18
AB9
B
120 129Right-handed alpha
Helix 19
AC1
B
140 153Right-handed alpha
Helix 20
AC2
B
186 196Right-handed alpha
Helix 21
AC3
B
206 219Right-handed alpha
Helix 22
AC4
B
220 233Right-handed alpha
Helix 23
AC5
B
265 275Right-handed alpha
Helix 24
AC6
B
292 297Right-handed alpha
Helix 25
AC7
B
297 312Right-handed alpha
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There are 2 sheets in PDB entry 6ZMM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 39first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
58 62parallel
Strand 5
A
134 139parallel
Strand 6
A
157 163parallel
Strand 7
A
255 260parallel
Strand 8
A
281 286parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 39first strand
Strand 2
B
42 48anti-parallel
Strand 3
B
90 95anti-parallel
Strand 4
B
58 62parallel
Strand 5
B
134 139parallel
Strand 6
B
157 163parallel
Strand 7
B
255 260parallel
Strand 8
B
281 286parallel
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