Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZMQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZMQ entry

There is 1 chain in PDB entry 6ZMQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS -9PRO 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6ZMQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 31Right-handed alpha
Helix 2
AA2
A
33 41Right-handed alpha
Helix 3
AA3
A
43 65Right-handed alpha
Helix 4
AA4
A
69 76Right-handed alpha
Helix 5
AA5
A
81 88Right-handed alpha
Helix 6
AA6
A
89 91Right-handed 310
Helix 7
AA7
A
92 113Right-handed alpha
Helix 8
AA8
A
117 141Right-handed alpha
Helix 9
AA9
A
167 197Right-handed alpha
Helix 10
AB1
A
206 231Right-handed alpha
Helix 11
AB2
A
244 247Right-handed 310
Helix 12
AB3
A
248 268Right-handed alpha
Helix 13
AB4
A
270 291Right-handed alpha
Helix 14
AB5
A
307 329Right-handed alpha
Helix 15
AB6
A
344 368Right-handed alpha
Helix 16
AB7
A
385 406Right-handed alpha
Helix 17
AB8
A
421 438Right-handed alpha
Helix 18
AB9
A
442 468Right-handed alpha
Helix 19
AC1
A
479 482Right-handed 310
Helix 20
AC2
A
483 509Right-handed alpha
Helix 21
AC3
A
609 628Right-handed alpha
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There are 3 sheets in PDB entry 6ZMQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 517first strand
Strand 2
A
600 608anti-parallel
Strand 3
A
586 591anti-parallel
Strand 4
A
582 583anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 525first strand
Strand 2
A
528 529anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 539first strand
Strand 2
A
544 549anti-parallel
Strand 3
A
561 564anti-parallel
Strand 4
A
576 577anti-parallel
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