Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZNJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZNJ entry

There are 3 chains in PDB entry 6ZNJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 16SER 776
C
 THR 16SER 776
A
 THR 16SER 53
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are115 helices in PDB entry 6ZNJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 28Right-handed alpha
Helix 2
AA2
B
44 52Right-handed alpha
Helix 3
AA3
B
56 66Right-handed alpha
Helix 4
AA4
B
69 74Right-handed alpha
Helix 5
AA5
B
75 77Right-handed 310
Helix 6
AA6
B
100 116Right-handed alpha
Helix 7
AA7
B
128 137Right-handed alpha
Helix 8
AA8
B
138 140Right-handed 310
Helix 9
AA9
B
154 167Right-handed alpha
Helix 10
AB1
B
174 194Right-handed alpha
Helix 11
AB2
B
197 201Right-handed 310
Helix 12
AB3
B
211 222Right-handed alpha
Helix 13
AB4
B
225 227Right-handed 310
Helix 14
AB5
B
249 254Right-handed 310
Helix 15
AB6
B
261 266Right-handed alpha
Helix 16
AB7
B
282 288Right-handed alpha
Helix 17
AB8
B
306 314Right-handed alpha
Helix 18
AB9
B
331 334Right-handed 310
Helix 19
AC1
B
335 346Right-handed alpha
Helix 20
AC2
B
352 368Right-handed alpha
Helix 21
AC3
B
372 379Right-handed alpha
Helix 22
AC4
B
398 415Right-handed alpha
Helix 23
AC5
B
424 435Right-handed alpha
Helix 24
AC6
B
437 455Right-handed alpha
Helix 25
AC7
B
471 483Right-handed alpha
Helix 26
AC8
B
494 505Right-handed alpha
Helix 27
AC9
B
507 511Right-handed 310
Helix 28
AD1
B
523 536Right-handed alpha
Helix 29
AD2
B
537 539Right-handed 310
Helix 30
AD3
B
541 550Right-handed alpha
Helix 31
AD4
B
551 562Right-handed alpha
Helix 32
AD5
B
575 587Right-handed alpha
Helix 33
AD6
B
620 638Right-handed alpha
Helix 34
AD7
B
657 673Right-handed alpha
Helix 35
AD8
B
683 689Right-handed alpha
Helix 36
AD9
B
689 697Right-handed alpha
Helix 37
AE1
B
713 727Right-handed alpha
Helix 38
AE2
B
752 776Right-handed alpha
Helix 39
AE3
C
17 28Right-handed alpha
Helix 40
AE4
C
44 52Right-handed alpha
Helix 41
AE5
C
56 66Right-handed alpha
Helix 42
AE6
C
69 74Right-handed alpha
Helix 43
AE7
C
75 77Right-handed 310
Helix 44
AE8
C
95 100Right-handed alpha
Helix 45
AE9
C
100 116Right-handed alpha
Helix 46
AF1
C
128 137Right-handed alpha
Helix 47
AF2
C
138 143Right-handed 310
Helix 48
AF3
C
154 167Right-handed alpha
Helix 49
AF4
C
174 194Right-handed alpha
Helix 50
AF5
C
197 201Right-handed 310
Helix 51
AF6
C
209 222Right-handed alpha
Helix 52
AF7
C
225 227Right-handed 310
Helix 53
AF8
C
249 254Right-handed 310
Helix 54
AF9
C
261 266Right-handed alpha
Helix 55
AG1
C
282 288Right-handed alpha
Helix 56
AG2
C
306 314Right-handed alpha
Helix 57
AG3
C
331 334Right-handed 310
Helix 58
AG4
C
335 346Right-handed alpha
Helix 59
AG5
C
352 368Right-handed alpha
Helix 60
AG6
C
372 379Right-handed alpha
Helix 61
AG7
C
398 415Right-handed alpha
Helix 62
AG8
C
424 435Right-handed alpha
Helix 63
AG9
C
437 455Right-handed alpha
Helix 64
AH1
C
471 483Right-handed alpha
Helix 65
AH2
C
494 505Right-handed alpha
Helix 66
AH3
C
507 511Right-handed 310
Helix 67
AH4
C
517 521Right-handed 310
Helix 68
AH5
C
523 536Right-handed alpha
Helix 69
AH6
C
541 551Right-handed alpha
Helix 70
AH7
C
551 562Right-handed alpha
Helix 71
AH8
C
575 587Right-handed alpha
Helix 72
AH9
C
620 638Right-handed alpha
Helix 73
AI1
C
657 673Right-handed alpha
Helix 74
AI2
C
683 689Right-handed alpha
Helix 75
AI3
C
689 697Right-handed alpha
Helix 76
AI4
C
713 728Right-handed alpha
Helix 77
AI5
C
752 776Right-handed alpha
Helix 78
AI6
A
17 28Right-handed alpha
Helix 79
AI7
A
44 52Right-handed alpha
Helix 80
AI8
A
56 66Right-handed alpha
Helix 81
AI9
A
69 74Right-handed alpha
Helix 82
AJ1
A
75 77Right-handed 310
Helix 83
AJ2
A
96 116Right-handed alpha
Helix 84
AJ3
A
128 137Right-handed alpha
Helix 85
AJ4
A
138 140Right-handed 310
Helix 86
AJ5
A
154 167Right-handed alpha
Helix 87
AJ6
A
174 194Right-handed alpha
Helix 88
AJ7
A
197 201Right-handed 310
Helix 89
AJ8
A
211 222Right-handed alpha
Helix 90
AJ9
A
225 227Right-handed 310
Helix 91
AK1
A
249 253Right-handed 310
Helix 92
AK2
A
261 267Right-handed alpha
Helix 93
AK3
A
282 288Right-handed alpha
Helix 94
AK4
A
306 314Right-handed alpha
Helix 95
AK5
A
331 334Right-handed 310
Helix 96
AK6
A
335 346Right-handed alpha
Helix 97
AK7
A
352 368Right-handed alpha
Helix 98
AK8
A
372 379Right-handed alpha
Helix 99
AK9
A
398 415Right-handed alpha
Helix 100
AL1
A
424 435Right-handed alpha
Helix 101
AL2
A
439 455Right-handed alpha
Helix 102
AL3
A
471 484Right-handed alpha
Helix 103
AL4
A
494 505Right-handed alpha
Helix 104
AL5
A
507 511Right-handed 310
Helix 105
AL6
A
523 536Right-handed alpha
Helix 106
AL7
A
537 539Right-handed 310
Helix 107
AL8
A
541 550Right-handed alpha
Helix 108
AL9
A
551 562Right-handed alpha
Helix 109
AM1
A
575 587Right-handed alpha
Helix 110
AM2
A
620 638Right-handed alpha
Helix 111
AM3
A
657 673Right-handed alpha
Helix 112
AM4
A
684 689Right-handed alpha
Helix 113
AM5
A
689 697Right-handed alpha
Helix 114
AM6
A
713 728Right-handed alpha
Helix 115
AM7
A
752 776Right-handed alpha
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There are 13 sheets in PDB entry 6ZNJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 38first strand
Strand 2
C
34 38anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 123first strand
Strand 2
B
79 84parallel
Strand 3
B
145 148parallel
Strand 4
B
171 173parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 237first strand
Strand 2
B
229 233anti-parallel
Strand 3
B
203 206parallel
Strand 4
B
271 274parallel
Strand 5
B
294 297parallel
Strand 6
B
318 321parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
514 516first strand
Strand 2
B
488 492parallel
Strand 3
B
463 466parallel
Strand 4
B
567 570parallel
Strand 5
B
743 746parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
677 682first strand
Strand 2
B
643 647parallel
Strand 3
B
708 710parallel
Strand 4
B
607 611parallel
Strand 5
B
596 602anti-parallel
Strand 6
B
731 738anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
118 123first strand
Strand 2
C
79 84parallel
Strand 3
C
145 148parallel
Strand 4
C
171 173parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
236 238first strand
Strand 2
C
229 233anti-parallel
Strand 3
C
203 206parallel
Strand 4
C
271 274parallel
Strand 5
C
294 297parallel
Strand 6
C
318 320parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
515 516first strand
Strand 2
C
488 492parallel
Strand 3
C
463 466parallel
Strand 4
C
567 570parallel
Strand 5
C
744 746parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
677 682first strand
Strand 2
C
643 647parallel
Strand 3
C
708 710parallel
Strand 4
C
607 611parallel
Strand 5
C
596 602anti-parallel
Strand 6
C
731 738anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 123first strand
Strand 2
A
79 84parallel
Strand 3
A
145 148parallel
Strand 4
A
171 173parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
229 233anti-parallel
Strand 3
A
203 206parallel
Strand 4
A
271 274parallel
Strand 5
A
294 297parallel
Strand 6
A
318 320parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 516first strand
Strand 2
A
488 492parallel
Strand 3
A
463 466parallel
Strand 4
A
567 570parallel
Strand 5
A
743 746parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 682first strand
Strand 2
A
643 647parallel
Strand 3
A
708 710parallel
Strand 4
A
607 611parallel
Strand 5
A
596 602anti-parallel
Strand 6
A
731 738anti-parallel
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