Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZNN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZNN entry

There are 12 chains in PDB entry 6ZNN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	ILE 7	PHE 376
H	ALA 6	PHE 375
I	ILE 7	PHE 376
J	GLU 12	LEU 390
M	ASP 3	GLU 87
S	UNK 1	UNK 68
T	UNK 1	UNK 68
U	SER 8	TYR 174
V	MET 1	LEU 179
X	UNK 131	UNK 223
Y	ALA 2	PRO 464
x	UNK 131	UNK 222

There are 86 helices in PDB entry 6ZNN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	59	65	Right-handed alpha
Helix 2	AA2	G	82	95	Right-handed alpha
Helix 3	AA3	G	117	131	Right-handed alpha
Helix 4	AA4	G	141	151	Right-handed alpha
Helix 5	AA5	G	177	180	Right-handed 310
Helix 6	AA6	G	186	202	Right-handed alpha
Helix 7	AA7	G	209	221	Right-handed alpha
Helix 8	AA8	G	227	234	Right-handed alpha
Helix 9	AA9	G	253	258	Right-handed alpha
Helix 10	AB1	G	259	263	Right-handed 310
Helix 11	AB2	G	274	286	Right-handed alpha
Helix 12	AB3	G	287	289	Right-handed 310
Helix 13	AB4	G	290	297	Right-handed alpha
Helix 14	AB5	G	302	306	Right-handed 310
Helix 15	AB6	G	309	322	Right-handed alpha
Helix 16	AB7	G	338	350	Right-handed alpha
Helix 17	AB8	G	352	357	Right-handed alpha
Helix 18	AB9	G	360	367	Right-handed alpha
Helix 19	AC1	G	367	375	Right-handed alpha
Helix 20	AC2	H	55	61	Right-handed alpha
Helix 21	AC3	H	78	91	Right-handed alpha
Helix 22	AC4	H	112	126	Right-handed alpha
Helix 23	AC5	H	137	144	Right-handed alpha
Helix 24	AC6	H	172	175	Right-handed 310
Helix 25	AC7	H	181	197	Right-handed alpha
Helix 26	AC8	H	202	217	Right-handed alpha
Helix 27	AC9	H	222	233	Right-handed alpha
Helix 28	AD1	H	252	257	Right-handed alpha
Helix 29	AD2	H	258	263	Right-handed alpha
Helix 30	AD3	H	273	285	Right-handed alpha
Helix 31	AD4	H	289	296	Right-handed alpha
Helix 32	AD5	H	301	305	Right-handed 310
Helix 33	AD6	H	308	321	Right-handed alpha
Helix 34	AD7	H	337	349	Right-handed alpha
Helix 35	AD8	H	350	355	Right-handed 310
Helix 36	AD9	H	359	366	Right-handed alpha
Helix 37	AE1	H	368	373	Right-handed alpha
Helix 38	AE2	I	59	65	Right-handed alpha
Helix 39	AE3	I	82	94	Right-handed alpha
Helix 40	AE4	I	117	131	Right-handed alpha
Helix 41	AE5	I	142	151	Right-handed alpha
Helix 42	AE6	I	186	202	Right-handed alpha
Helix 43	AE7	I	209	221	Right-handed alpha
Helix 44	AE8	I	227	234	Right-handed alpha
Helix 45	AE9	I	253	258	Right-handed alpha
Helix 46	AF1	I	259	263	Right-handed 310
Helix 47	AF2	I	274	286	Right-handed alpha
Helix 48	AF3	I	287	296	Right-handed alpha
Helix 49	AF4	I	309	322	Right-handed alpha
Helix 50	AF5	I	338	350	Right-handed alpha
Helix 51	AF6	I	352	357	Right-handed alpha
Helix 52	AF7	I	360	367	Right-handed alpha
Helix 53	AF8	I	369	375	Right-handed alpha
Helix 54	AF9	J	60	78	Right-handed alpha
Helix 55	AG1	J	98	112	Right-handed alpha
Helix 56	AG2	J	122	132	Right-handed alpha
Helix 57	AG3	J	158	161	Right-handed 310
Helix 58	AG4	J	167	182	Right-handed alpha
Helix 59	AG5	J	203	214	Right-handed alpha
Helix 60	AG6	J	219	232	Right-handed alpha
Helix 61	AG7	J	259	266	Right-handed alpha
Helix 62	AG8	J	267	272	Right-handed alpha
Helix 63	AG9	J	279	291	Right-handed alpha
Helix 64	AH1	J	295	302	Right-handed alpha
Helix 65	AH2	J	307	312	Right-handed 310
Helix 66	AH3	J	314	329	Right-handed alpha
Helix 67	AH4	J	329	334	Right-handed alpha
Helix 68	AH5	J	349	352	Right-handed 310
Helix 69	AH6	J	353	363	Right-handed alpha
Helix 70	AH7	J	364	372	Right-handed alpha
Helix 71	AH8	J	375	382	Right-handed alpha
Helix 72	AH9	M	4	9	Right-handed alpha
Helix 73	AI1	M	51	60	Right-handed alpha
Helix 74	AI2	S	2	68	Right-handed alpha
Helix 75	AI3	T	2	68	Right-handed alpha
Helix 76	AI4	U	65	70	Right-handed alpha
Helix 77	AI5	U	161	171	Right-handed alpha
Helix 78	AI6	V	161	175	Right-handed alpha
Helix 79	AI7	X	132	221	Right-handed alpha
Helix 80	AI8	Y	59	67	Right-handed alpha
Helix 81	AI9	Y	117	122	Right-handed alpha
Helix 82	AJ1	Y	141	172	Right-handed alpha
Helix 83	AJ2	Y	251	257	Right-handed alpha
Helix 84	AJ3	Y	308	312	Right-handed 310
Helix 85	AJ4	Y	446	452	Right-handed alpha
Helix 86	AJ5	x	132	222	Right-handed alpha

There are 38 sheets in PDB entry 6ZNN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	36	first strand
Strand 2	G	20	25	anti-parallel
Strand 3	G	12	15	anti-parallel
Strand 4	G	108	111	parallel
Strand 5	G	136	140	parallel
Strand 6	G	358	359	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	58	first strand
Strand 2	G	39	42	anti-parallel
Strand 3	G	69	70	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	76	first strand
Strand 2	G	79	80	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	174	175	first strand
Strand 2	G	165	171	anti-parallel
Strand 3	G	181	183	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	174	175	first strand
Strand 2	G	165	171	anti-parallel
Strand 3	G	155	160	anti-parallel
Strand 4	G	298	301	parallel
Strand 5	G	330	333	parallel
Strand 6	M	46	48	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	242	first strand
Strand 2	G	248	250	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	32	first strand
Strand 2	H	16	21	anti-parallel
Strand 3	H	8	12	anti-parallel
Strand 4	H	103	107	parallel
Strand 5	H	131	136	parallel
Strand 6	H	357	358	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	54	first strand
Strand 2	H	35	38	anti-parallel
Strand 3	H	65	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	72	first strand
Strand 2	H	75	76	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	170	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	176	178	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	170	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	150	155	anti-parallel
Strand 4	H	297	298	parallel
Strand 5	H	329	330	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	239	241	first strand
Strand 2	H	247	249	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	36	first strand
Strand 2	I	20	25	anti-parallel
Strand 3	I	12	15	anti-parallel
Strand 4	I	108	112	parallel
Strand 5	I	136	141	parallel
Strand 6	I	358	359	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	58	first strand
Strand 2	I	39	42	anti-parallel
Strand 3	I	69	72	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	76	first strand
Strand 2	I	79	80	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	181	183	first strand
Strand 2	I	165	170	anti-parallel
Strand 3	I	155	160	anti-parallel
Strand 4	I	298	301	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	240	242	first strand
Strand 2	I	248	250	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	329	331	first strand
Strand 2	M	19	21	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	37	40	first strand
Strand 2	J	24	29	anti-parallel
Strand 3	J	16	19	anti-parallel
Strand 4	J	89	92	parallel
Strand 5	J	117	121	parallel
Strand 6	J	373	374	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	42	43	first strand
Strand 2	J	52	53	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	155	156	first strand
Strand 2	J	146	152	anti-parallel
Strand 3	J	162	164	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	155	156	first strand
Strand 2	J	146	152	anti-parallel
Strand 3	J	136	141	anti-parallel
Strand 4	J	303	306	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	185	186	first strand
Strand 2	J	254	258	anti-parallel
Strand 3	J	246	250	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	23	25	first strand
Strand 2	U	41	43	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	48	49	first strand
Strand 2	U	82	83	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	88	90	first strand
Strand 2	U	105	107	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	141	143	first strand
Strand 2	U	151	153	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	8	10	first strand
Strand 2	V	176	178	parallel

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There are 9 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	15	17	first strand
Strand 2	V	20	22	anti-parallel
Strand 3	V	41	42	parallel
Strand 4	V	62	63	parallel
Strand 5	V	92	93	parallel
Strand 6	V	109	110	parallel
Strand 7	V	127	128	parallel
Strand 8	V	145	147	parallel
Strand 9	V	152	155	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	35	36	first strand
Strand 2	V	56	57	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	68	69	first strand
Strand 2	V	98	99	parallel
Strand 3	V	115	116	parallel
Strand 4	V	133	134	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	73	74	first strand
Strand 2	V	81	82	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	121	122	first strand
Strand 2	V	139	140	parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	21	22	first strand
Strand 2	Y	11	13	anti-parallel
Strand 3	Y	453	461	anti-parallel
Strand 4	Y	423	431	anti-parallel
Strand 5	Y	343	344	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	57	58	first strand
Strand 2	Y	43	50	anti-parallel
Strand 3	Y	277	283	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	69	74	first strand
Strand 2	Y	273	275	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	84	86	first strand
Strand 2	Y	108	110	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	316	317	first strand
Strand 2	Y	330	334	anti-parallel
Strand 3	Y	408	411	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZNN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZNN