Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZOE entry

There are 2 chains in PDB entry 6ZOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 1040
B
 GLY 11GLN 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6ZOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
8 30Right-handed alpha
Helix 3
AA3
A
53 61Right-handed alpha
Helix 4
AA4
A
61 67Right-handed alpha
Helix 5
AA5
A
99 112Right-handed alpha
Helix 6
AA6
A
113 118Right-handed 310
Helix 7
AA7
A
119 126Right-handed alpha
Helix 8
AA8
A
150 162Right-handed alpha
Helix 9
AA9
A
162 168Right-handed alpha
Helix 10
AB1
A
189 196Right-handed alpha
Helix 11
AB2
A
199 211Right-handed alpha
Helix 12
AB3
A
242 248Right-handed alpha
Helix 13
AB4
A
298 313Right-handed alpha
Helix 14
AB5
A
314 317Right-handed 310
Helix 15
AB6
A
329 359Right-handed alpha
Helix 16
AB7
A
366 387Right-handed alpha
Helix 17
AB8
A
391 424Right-handed alpha
Helix 18
AB9
A
426 454Right-handed alpha
Helix 19
AC1
A
455 459Right-handed 310
Helix 20
AC2
A
460 486Right-handed alpha
Helix 21
AC3
A
487 497Right-handed alpha
Helix 22
AC4
A
510 535Right-handed alpha
Helix 23
AC5
A
537 559Right-handed alpha
Helix 24
AC6
A
583 599Right-handed alpha
Helix 25
AC7
A
633 637Right-handed 310
Helix 26
AC8
A
639 642Right-handed 310
Helix 27
AC9
A
643 655Right-handed alpha
Helix 28
AD1
A
691 707Right-handed alpha
Helix 29
AD2
A
732 739Right-handed alpha
Helix 30
AD3
A
742 755Right-handed alpha
Helix 31
AD4
A
777 780Right-handed 310
Helix 32
AD5
A
782 788Right-handed 310
Helix 33
AD6
A
801 804Right-handed alpha
Helix 34
AD7
A
836 849Right-handed alpha
Helix 35
AD8
A
860 869Right-handed alpha
Helix 36
AD9
A
871 893Right-handed alpha
Helix 37
AE1
A
897 903Right-handed alpha
Helix 38
AE2
A
904 920Right-handed alpha
Helix 39
AE3
A
924 956Right-handed alpha
Helix 40
AE4
A
959 986Right-handed alpha
Helix 41
AE5
A
986 992Right-handed alpha
Helix 42
AE6
A
996 1033Right-handed alpha
Helix 43
AE7
B
12 25Right-handed alpha
Helix 44
AE8
B
26 36Right-handed alpha
Helix 45
AE9
B
49 58Right-handed alpha
Helix 46
AF1
B
59 69Right-handed alpha
Helix 47
AF2
B
82 90Right-handed alpha
Helix 48
AF3
B
92 102Right-handed alpha
Helix 49
AF4
B
115 123Right-handed alpha
Helix 50
AF5
B
125 135Right-handed alpha
Helix 51
AF6
B
148 157Right-handed alpha
Helix 52
AF7
B
158 165Right-handed alpha
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There are 9 sheets in PDB entry 6ZOE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
87 94anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
815 819anti-parallel
Strand 6
A
822 831anti-parallel
Strand 7
A
713 718anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
87 94anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
815 819anti-parallel
Strand 6
A
822 831anti-parallel
Strand 7
A
680 686anti-parallel
Strand 8
A
855 859anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
284 293anti-parallel
Strand 3
A
136 144anti-parallel
Strand 4
A
321 328anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
284 293anti-parallel
Strand 3
A
278 281anti-parallel
Strand 4
A
606 615anti-parallel
Strand 5
A
620 631anti-parallel
Strand 6
A
571 577anti-parallel
Strand 7
A
662 666anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
767 775parallel
Strand 4
A
757 764anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
232 235anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 253first strand
Strand 2
A
259 261anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 731first strand
Strand 2
A
805 812anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 792first strand
Strand 2
A
798 800anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il