Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZOO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZOO entry

There are 14 chains in PDB entry 6ZOO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 16	THR 114
A	ILE 116	THR 635
A	ILE 637	GLY 758
B	ALA 2	GLY 734
C	SER 2	TYR 81
D	GLY 69	LEU 211
E	PRO 64	LYS 129
F	ASP 78	VAL 231
G	LEU 58	PHE 154
H	TYR 48	GLY 140
I	ILE 2	LEU 32
J	MET 1	PHE 42
K	PHE 46	GLY 126
L	TYR 54	GLU 124

There are147 helices in PDB entry 6ZOO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	36	Right-handed alpha
Helix 2	AA2	A	41	47	Right-handed alpha
Helix 3	AA3	A	50	60	Right-handed alpha
Helix 4	AA4	A	63	68	Right-handed alpha
Helix 5	AA5	A	70	103	Right-handed alpha
Helix 6	AA6	A	105	112	Right-handed alpha
Helix 7	AA7	A	128	133	Right-handed 310
Helix 8	AA8	A	148	157	Right-handed alpha
Helix 9	AA9	A	160	188	Right-handed alpha
Helix 10	AB1	A	192	197	Right-handed alpha
Helix 11	AB2	A	198	209	Right-handed alpha
Helix 12	AB3	A	210	225	Right-handed alpha
Helix 13	AB4	A	225	235	Right-handed alpha
Helix 14	AB5	A	238	242	Right-handed 310
Helix 15	AB6	A	246	251	Right-handed alpha
Helix 16	AB7	A	252	259	Right-handed alpha
Helix 17	AB8	A	260	263	Right-handed 310
Helix 18	AB9	A	266	271	Right-handed alpha
Helix 19	AC1	A	273	280	Right-handed 310
Helix 20	AC2	A	295	314	Right-handed alpha
Helix 21	AC3	A	326	333	Right-handed alpha
Helix 22	AC4	A	345	351	Right-handed alpha
Helix 23	AC5	A	353	379	Right-handed alpha
Helix 24	AC6	A	388	421	Right-handed alpha
Helix 25	AC7	A	429	438	Right-handed alpha
Helix 26	AC8	A	438	470	Right-handed alpha
Helix 27	AC9	A	472	476	Right-handed 310
Helix 28	AD1	A	486	498	Right-handed alpha
Helix 29	AD2	A	535	562	Right-handed alpha
Helix 30	AD3	A	571	576	Right-handed alpha
Helix 31	AD4	A	584	588	Right-handed 310
Helix 32	AD5	A	593	624	Right-handed alpha
Helix 33	AD6	A	641	646	Right-handed alpha
Helix 34	AD7	A	648	656	Right-handed alpha
Helix 35	AD8	A	656	666	Right-handed alpha
Helix 36	AD9	A	672	695	Right-handed alpha
Helix 37	AE1	A	696	713	Right-handed alpha
Helix 38	AE2	A	726	758	Right-handed alpha
Helix 39	AE3	B	9	14	Right-handed alpha
Helix 40	AE4	B	18	26	Right-handed alpha
Helix 41	AE5	B	30	34	Right-handed 310
Helix 42	AE6	B	38	71	Right-handed alpha
Helix 43	AE7	B	73	80	Right-handed alpha
Helix 44	AE8	B	97	105	Right-handed alpha
Helix 45	AE9	B	119	128	Right-handed alpha
Helix 46	AF1	B	131	158	Right-handed alpha
Helix 47	AF2	B	164	169	Right-handed alpha
Helix 48	AF3	B	170	181	Right-handed alpha
Helix 49	AF4	B	183	197	Right-handed alpha
Helix 50	AF5	B	197	202	Right-handed alpha
Helix 51	AF6	B	222	228	Right-handed alpha
Helix 52	AF7	B	229	235	Right-handed 310
Helix 53	AF8	B	269	288	Right-handed alpha
Helix 54	AF9	B	300	308	Right-handed alpha
Helix 55	AG1	B	321	329	Right-handed alpha
Helix 56	AG2	B	329	355	Right-handed alpha
Helix 57	AG3	B	364	397	Right-handed alpha
Helix 58	AG4	B	406	414	Right-handed alpha
Helix 59	AG5	B	414	446	Right-handed alpha
Helix 60	AG6	B	448	452	Right-handed 310
Helix 61	AG7	B	457	467	Right-handed alpha
Helix 62	AG8	B	483	489	Right-handed alpha
Helix 63	AG9	B	493	503	Right-handed alpha
Helix 64	AH1	B	513	540	Right-handed alpha
Helix 65	AH2	B	549	554	Right-handed 310
Helix 66	AH3	B	571	603	Right-handed alpha
Helix 67	AH4	B	605	613	Right-handed alpha
Helix 68	AH5	B	615	623	Right-handed alpha
Helix 69	AH6	B	625	627	Right-handed 310
Helix 70	AH7	B	628	633	Right-handed alpha
Helix 71	AH8	B	643	666	Right-handed alpha
Helix 72	AH9	B	667	684	Right-handed alpha
Helix 73	AI1	B	701	733	Right-handed alpha
Helix 74	AI2	C	15	21	Right-handed alpha
Helix 75	AI3	C	44	48	Right-handed 310
Helix 76	AI4	C	54	58	Right-handed 310
Helix 77	AI5	D	92	98	Right-handed alpha
Helix 78	AI6	D	134	148	Right-handed alpha
Helix 79	AI7	D	191	195	Right-handed 310
Helix 80	AI8	D	197	202	Right-handed 310
Helix 81	AI9	F	78	82	Right-handed 310
Helix 82	AJ1	F	88	107	Right-handed alpha
Helix 83	AJ2	F	113	137	Right-handed alpha
Helix 84	AJ3	F	153	155	Right-handed 310
Helix 85	AJ4	F	156	185	Right-handed alpha
Helix 86	AJ5	F	186	188	Right-handed 310
Helix 87	AJ6	F	192	197	Right-handed alpha
Helix 88	AJ7	F	199	207	Right-handed alpha
Helix 89	AJ8	F	208	211	Right-handed 310
Helix 90	AJ9	F	212	223	Right-handed alpha
Helix 91	AK1	G	59	78	Right-handed alpha
Helix 92	AK2	G	79	91	Right-handed alpha
Helix 93	AK3	G	101	104	Right-handed 310
Helix 94	AK4	G	105	109	Right-handed 310
Helix 95	AK5	G	111	116	Right-handed alpha
Helix 96	AK6	G	124	148	Right-handed alpha
Helix 97	AK7	H	59	64	Right-handed alpha
Helix 98	AK8	H	79	90	Right-handed alpha
Helix 99	AK9	H	91	94	Right-handed 310
Helix 100	AL1	H	95	117	Right-handed alpha
Helix 101	AL2	H	123	128	Right-handed alpha
Helix 102	AL3	I	3	14	Right-handed alpha
Helix 103	AL4	I	14	29	Right-handed alpha
Helix 104	AL5	J	2	9	Right-handed alpha
Helix 105	AL6	J	10	33	Right-handed alpha
Helix 106	AL7	K	49	68	Right-handed alpha
Helix 107	AL8	K	100	126	Right-handed alpha
Helix 108	AL9	L	61	63	Right-handed 310
Helix 109	AM1	L	76	85	Right-handed alpha
Helix 110	AM2	L	86	90	Right-handed 310
Helix 111	AM3	L	94	118	Right-handed alpha
Helix 112	AM4	L	125	153	Right-handed alpha
Helix 113	AM5	L	174	177	Right-handed 310
Helix 114	AM6	L	178	204	Right-handed alpha
Helix 115	AM7	1	69	100	Right-handed alpha
Helix 116	AM8	1	106	114	Right-handed 310
Helix 117	AM9	1	130	151	Right-handed alpha
Helix 118	AN1	1	162	166	Right-handed 310
Helix 119	AN2	1	173	205	Right-handed alpha
Helix 120	AN3	1	209	220	Right-handed alpha
Helix 121	AN4	1	226	231	Right-handed alpha
Helix 122	AN5	2	95	129	Right-handed alpha
Helix 123	AN6	2	148	173	Right-handed alpha
Helix 124	AN7	2	197	202	Right-handed alpha
Helix 125	AN8	2	210	242	Right-handed alpha
Helix 126	AN9	2	245	256	Right-handed alpha
Helix 127	AO1	2	261	265	Right-handed 310
Helix 128	AO2	3	61	68	Right-handed alpha
Helix 129	AO3	3	94	117	Right-handed alpha
Helix 130	AO4	3	118	123	Right-handed alpha
Helix 131	AO5	3	142	146	Right-handed 310
Helix 132	AO6	3	154	178	Right-handed alpha
Helix 133	AO7	3	180	184	Right-handed 310
Helix 134	AO8	3	190	194	Right-handed 310
Helix 135	AO9	3	204	209	Right-handed alpha
Helix 136	AP1	3	216	248	Right-handed alpha
Helix 137	AP2	3	251	262	Right-handed alpha
Helix 138	AP3	3	267	273	Right-handed 310
Helix 139	AP4	4	84	119	Right-handed alpha
Helix 140	AP5	4	137	162	Right-handed alpha
Helix 141	AP6	4	186	190	Right-handed 310
Helix 142	AP7	4	197	225	Right-handed alpha
Helix 143	AP8	4	228	239	Right-handed alpha
Helix 144	AP9	4	240	243	Right-handed 310
Helix 145	AQ1	4	244	249	Right-handed alpha
Helix 146	AQ2	P	51	56	Right-handed alpha
Helix 147	AQ3	P	87	91	Right-handed 310

There are 19 sheets in PDB entry 6ZOO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	24	first strand
Strand 2	A	189	191	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	141	142	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	526	529	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	626	627	first strand
Strand 2	A	635	636	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	90	first strand
Strand 2	B	113	115	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	455	first strand
Strand 2	F	146	148	parallel
Strand 3	F	139	140	anti-parallel
Strand 4	F	83	84	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	636	first strand
Strand 2	B	639	640	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	187	188	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	132	first strand
Strand 2	D	100	105	anti-parallel
Strand 3	D	153	158	anti-parallel
Strand 4	D	164	168	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	114	first strand
Strand 2	D	120	123	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	120	first strand
Strand 2	E	103	106	anti-parallel
Strand 3	E	87	93	anti-parallel
Strand 4	E	73	76	anti-parallel
Strand 5	E	125	127	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	95	first strand
Strand 2	G	98	99	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	76	78	first strand
Strand 2	K	84	86	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	58	59	first strand
Strand 2	L	69	70	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	120	121	first strand
Strand 2	1	124	125	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	14	15	first strand
Strand 2	P	2	5	anti-parallel
Strand 3	P	27	31	parallel
Strand 4	P	69	72	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	18	21	first strand
Strand 2	P	95	98	parallel
Strand 3	P	78	80	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	40	41	first strand
Strand 2	P	82	83	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZOO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZOO