Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZP5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZP5 entry

There are 3 chains in PDB entry 6ZP5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 1	PHE 1121
B	ALA 1	ASP 943
C	ALA 1	SER 1121

There are 61 helices in PDB entry 6ZP5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	267	277	Right-handed alpha
Helix 2	AA2	A	311	316	Right-handed alpha
Helix 3	AA3	A	338	343	Right-handed alpha
Helix 4	AA4	A	356	360	Right-handed 310
Helix 5	AA5	A	377	381	Right-handed alpha
Helix 6	AA6	A	389	395	Right-handed alpha
Helix 7	AA7	A	411	416	Right-handed alpha
Helix 8	AA8	A	475	478	Right-handed 310
Helix 9	AA9	A	710	716	Right-handed alpha
Helix 10	AB1	A	719	728	Right-handed alpha
Helix 11	AB2	A	731	756	Right-handed alpha
Helix 12	AB3	A	789	798	Right-handed alpha
Helix 13	AB4	A	839	857	Right-handed alpha
Helix 14	AB5	A	870	881	Right-handed alpha
Helix 15	AB6	A	885	892	Right-handed alpha
Helix 16	AB7	A	892	913	Right-handed alpha
Helix 17	AB8	A	918	938	Right-handed alpha
Helix 18	AB9	A	939	941	Right-handed 310
Helix 19	AC1	A	949	956	Right-handed alpha
Helix 20	AC2	A	958	1005	Right-handed alpha
Helix 21	AC3	A	1113	1120	Right-handed alpha
Helix 22	AC4	B	190	200	Right-handed alpha
Helix 23	AC5	B	233	240	Right-handed alpha
Helix 24	AC6	B	260	267	Right-handed alpha
Helix 25	AC7	B	280	284	Right-handed 310
Helix 26	AC8	B	299	306	Right-handed alpha
Helix 27	AC9	B	312	317	Right-handed alpha
Helix 28	AD1	B	558	565	Right-handed alpha
Helix 29	AD2	B	567	578	Right-handed alpha
Helix 30	AD3	B	579	604	Right-handed alpha
Helix 31	AD4	B	637	647	Right-handed alpha
Helix 32	AD5	B	663	681	Right-handed alpha
Helix 33	AD6	B	683	688	Right-handed alpha
Helix 34	AD7	B	694	706	Right-handed alpha
Helix 35	AD8	B	710	716	Right-handed alpha
Helix 36	AD9	B	716	738	Right-handed alpha
Helix 37	AE1	B	742	762	Right-handed alpha
Helix 38	AE2	B	763	765	Right-handed 310
Helix 39	AE3	B	773	780	Right-handed alpha
Helix 40	AE4	B	782	830	Right-handed alpha
Helix 41	AE5	B	937	943	Right-handed alpha
Helix 42	AE6	C	268	278	Right-handed alpha
Helix 43	AE7	C	312	317	Right-handed alpha
Helix 44	AE8	C	339	345	Right-handed alpha
Helix 45	AE9	C	357	362	Right-handed 310
Helix 46	AF1	C	377	384	Right-handed 310
Helix 47	AF2	C	390	396	Right-handed alpha
Helix 48	AF3	C	542	546	Right-handed 310
Helix 49	AF4	C	711	718	Right-handed alpha
Helix 50	AF5	C	720	729	Right-handed alpha
Helix 51	AF6	C	732	757	Right-handed alpha
Helix 52	AF7	C	790	800	Right-handed alpha
Helix 53	AF8	C	840	859	Right-handed alpha
Helix 54	AF9	C	860	865	Right-handed alpha
Helix 55	AG1	C	871	884	Right-handed alpha
Helix 56	AG2	C	887	893	Right-handed alpha
Helix 57	AG3	C	893	915	Right-handed alpha
Helix 58	AG4	C	919	942	Right-handed alpha
Helix 59	AG5	C	950	957	Right-handed alpha
Helix 60	AG6	C	959	1007	Right-handed alpha
Helix 61	AG7	C	1114	1121	Right-handed alpha

There are 44 sheets in PDB entry 6ZP5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	33	38	anti-parallel
Strand 3	A	238	242	anti-parallel
Strand 4	A	63	68	anti-parallel
Strand 5	A	162	170	anti-parallel
Strand 6	A	173	181	anti-parallel
Strand 7	A	197	202	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	248	252	anti-parallel
Strand 3	A	258	263	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	28	first strand
Strand 2	A	244	245	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	79	first strand
Strand 2	A	211	213	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	99	102	anti-parallel
Strand 3	A	142	145	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	292	first strand
Strand 2	A	565	572	anti-parallel
Strand 3	A	582	586	anti-parallel
Strand 4	A	621	624	anti-parallel
Strand 5	A	615	618	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	301	first strand
Strand 2	A	512	516	parallel
Strand 3	A	519	527	anti-parallel
Strand 4	A	556	561	anti-parallel
Strand 5	A	546	551	anti-parallel
Strand 6	A	538	540	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	331	first strand
Strand 2	A	367	376	anti-parallel
Strand 3	A	480	489	anti-parallel
Strand 4	A	404	410	anti-parallel
Strand 5	A	349	353	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	335	first strand
Strand 2	A	497	498	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	427	first strand
Strand 2	A	465	467	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	447	first strand
Strand 2	A	461	462	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	627	628	first strand
Strand 2	A	664	668	parallel
Strand 3	A	644	648	anti-parallel
Strand 4	A	637	638	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	676	first strand
Strand 2	C	762	763	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	684	701	first strand
Strand 2	A	1032	1051	anti-parallel
Strand 3	A	1020	1028	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	684	701	first strand
Strand 2	A	1032	1051	anti-parallel
Strand 3	A	1067	1070	anti-parallel
Strand 4	A	1075	1079	anti-parallel
Strand 5	A	1082	1087	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	706	709	first strand
Strand 2	A	831	834	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	760	761	first strand
Strand 2	B	522	523	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1093	1095	first strand
Strand 2	A	1059	1063	anti-parallel
Strand 3	A	1054	1056	anti-parallel
Strand 4	A	1106	1107	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	35	39	anti-parallel
Strand 3	B	161	165	anti-parallel
Strand 4	B	49	54	anti-parallel
Strand 5	B	106	114	anti-parallel
Strand 6	B	117	125	anti-parallel
Strand 7	B	141	146	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	25	first strand
Strand 2	B	171	175	anti-parallel
Strand 3	B	181	186	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	103	first strand
Strand 2	B	85	88	anti-parallel
Strand 3	B	76	80	anti-parallel
Strand 4	B	62	65	anti-parallel
Strand 5	B	157	158	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	215	first strand
Strand 2	B	443	450	anti-parallel
Strand 3	B	460	464	anti-parallel
Strand 4	B	481	484	anti-parallel
Strand 5	B	475	477	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	224	first strand
Strand 2	B	389	394	parallel
Strand 3	B	397	405	anti-parallel
Strand 4	B	435	439	anti-parallel
Strand 5	B	423	428	anti-parallel
Strand 6	B	416	420	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	254	first strand
Strand 2	B	291	295	anti-parallel
Strand 3	B	362	366	anti-parallel
Strand 4	B	328	331	anti-parallel
Strand 5	B	272	275	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	258	first strand
Strand 2	B	375	376	parallel
Strand 3	B	287	288	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	488	first strand
Strand 2	B	513	517	parallel
Strand 3	B	503	507	anti-parallel
Strand 4	B	497	500	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	549	first strand
Strand 2	B	856	875	anti-parallel
Strand 3	B	844	852	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	549	first strand
Strand 2	B	856	875	anti-parallel
Strand 3	B	891	894	anti-parallel
Strand 4	B	899	902	anti-parallel
Strand 5	B	910	911	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	555	557	first strand
Strand 2	B	655	657	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	917	919	first strand
Strand 2	B	884	887	anti-parallel
Strand 3	B	878	879	anti-parallel
Strand 4	B	930	931	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	34	36	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	22	25	first strand
Strand 2	C	249	253	anti-parallel
Strand 3	C	259	264	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	245	246	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	181	first strand
Strand 2	C	164	171	anti-parallel
Strand 3	C	64	69	anti-parallel
Strand 4	C	238	243	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	95	first strand
Strand 2	C	100	103	anti-parallel
Strand 3	C	143	146	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	293	first strand
Strand 2	C	566	575	anti-parallel
Strand 3	C	583	587	anti-parallel
Strand 4	C	622	625	anti-parallel
Strand 5	C	617	618	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	302	first strand
Strand 2	C	512	517	parallel
Strand 3	C	520	528	anti-parallel
Strand 4	C	558	562	anti-parallel
Strand 5	C	549	551	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	332	first strand
Strand 2	C	369	373	anti-parallel
Strand 3	C	485	489	anti-parallel
Strand 4	C	406	409	anti-parallel
Strand 5	C	350	353	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	335	336	first strand
Strand 2	C	498	499	parallel
Strand 3	C	365	366	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	628	629	first strand
Strand 2	C	665	670	parallel
Strand 3	C	644	649	anti-parallel
Strand 4	C	638	641	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	685	702	first strand
Strand 2	C	1033	1052	anti-parallel
Strand 3	C	1021	1029	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	685	702	first strand
Strand 2	C	1033	1052	anti-parallel
Strand 3	C	1068	1071	anti-parallel
Strand 4	C	1076	1079	anti-parallel
Strand 5	C	1087	1088	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	707	710	first strand
Strand 2	C	832	835	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1096	first strand
Strand 2	C	1060	1064	anti-parallel
Strand 3	C	1055	1057	anti-parallel
Strand 4	C	1107	1108	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZP5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZP5