Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZPH entry

There are 2 chains in PDB entry 6ZPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ARG 613
B
 ALA 26LEU 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6ZPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 23Right-handed alpha
Helix 2
AA2
A
34 50Right-handed alpha
Helix 3
AA3
A
87 109Right-handed alpha
Helix 4
AA4
A
111 127Right-handed alpha
Helix 5
AA5
A
136 153Right-handed alpha
Helix 6
AA6
A
154 173Right-handed alpha
Helix 7
AA7
A
200 221Right-handed alpha
Helix 8
AA8
A
223 239Right-handed alpha
Helix 9
AA9
A
249 263Right-handed alpha
Helix 10
AB1
A
267 282Right-handed alpha
Helix 11
AB2
A
305 330Right-handed alpha
Helix 12
AB3
A
393 413Right-handed alpha
Helix 13
AB4
A
416 432Right-handed alpha
Helix 14
AB5
A
437 462Right-handed alpha
Helix 15
AB6
A
463 494Right-handed alpha
Helix 16
AB7
A
499 524Right-handed alpha
Helix 17
AB8
A
540 557Right-handed alpha
Helix 18
AB9
A
563 583Right-handed alpha
Helix 19
AC1
A
589 607Right-handed alpha
Helix 20
AC2
A
607 612Right-handed alpha
Helix 21
AC3
B
81 99Right-handed alpha
Helix 22
AC4
B
114 120Right-handed alpha
Helix 23
AC5
B
134 151Right-handed alpha
Helix 24
AC6
B
207 228Right-handed alpha
Helix 25
AC7
B
288 304Right-handed alpha
Helix 26
AC8
B
318 326Right-handed alpha
Helix 27
AC9
B
346 362Right-handed alpha
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There are 4 sheets in PDB entry 6ZPH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
28 33parallel
Strand 3
B
335 340parallel
Strand 4
B
104 105parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
58 61anti-parallel
Strand 3
B
68 71anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 175first strand
Strand 2
B
161 170anti-parallel
Strand 3
B
237 245anti-parallel
Strand 4
B
259 265anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 189first strand
Strand 2
B
195 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il