Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZPN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZPN entry

There is 1 chain in PDB entry 6ZPN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 216	VAL 865

There are 88 helices in PDB entry 6ZPN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	229	234	Right-handed alpha
Helix 2	AA2	A	293	313	Right-handed alpha
Helix 3	AA3	A	325	340	Right-handed alpha
Helix 4	AA4	A	377	385	Right-handed alpha
Helix 5	AA5	A	398	404	Right-handed alpha
Helix 6	AA6	A	404	418	Right-handed alpha
Helix 7	AA7	A	455	463	Right-handed alpha
Helix 8	AA8	A	463	476	Right-handed alpha
Helix 9	AA9	A	483	489	Right-handed alpha
Helix 10	AB1	A	499	520	Right-handed alpha
Helix 11	AB2	A	521	530	Right-handed alpha
Helix 12	AB3	A	532	549	Right-handed alpha
Helix 13	AB4	A	550	553	Right-handed 310
Helix 14	AB5	A	569	584	Right-handed alpha
Helix 15	AB6	A	604	619	Right-handed alpha
Helix 16	AB7	A	620	623	Right-handed 310
Helix 17	AB8	A	630	638	Right-handed alpha
Helix 18	AB9	A	643	657	Right-handed alpha
Helix 19	AC1	A	658	669	Right-handed alpha
Helix 20	AC2	A	670	677	Right-handed alpha
Helix 21	AC3	A	678	680	Right-handed 310
Helix 22	AC4	A	685	698	Right-handed alpha
Helix 23	AC5	A	702	710	Right-handed alpha
Helix 24	AC6	A	711	721	Right-handed alpha
Helix 25	AC7	A	736	750	Right-handed alpha
Helix 26	AC8	A	752	762	Right-handed alpha
Helix 27	AC9	A	763	774	Right-handed alpha
Helix 28	AD1	A	777	792	Right-handed alpha
Helix 29	AD2	A	795	805	Right-handed alpha
Helix 30	AD3	A	806	813	Right-handed alpha
Helix 31	AD4	A	814	817	Right-handed 310
Helix 32	AD5	A	819	834	Right-handed alpha
Helix 33	AD6	A	840	856	Right-handed alpha
Helix 34	AD7	A	857	860	Right-handed 310
Helix 35	AD8	A	862	880	Right-handed alpha
Helix 36	AD9	A	880	898	Right-handed alpha
Helix 37	AE1	A	939	952	Right-handed alpha
Helix 38	AE2	A	956	976	Right-handed alpha
Helix 39	AE3	A	980	992	Right-handed alpha
Helix 40	AE4	A	1117	1123	Right-handed alpha
Helix 41	AE5	A	1124	1127	Right-handed 310
Helix 42	AE6	A	1162	1171	Right-handed alpha
Helix 43	AE7	B	217	221	Right-handed 310
Helix 44	AE8	B	229	233	Right-handed 310
Helix 45	AE9	B	293	313	Right-handed alpha
Helix 46	AF1	B	325	340	Right-handed alpha
Helix 47	AF2	B	377	385	Right-handed alpha
Helix 48	AF3	B	398	404	Right-handed alpha
Helix 49	AF4	B	404	416	Right-handed alpha
Helix 50	AF5	B	455	463	Right-handed alpha
Helix 51	AF6	B	463	476	Right-handed alpha
Helix 52	AF7	B	483	489	Right-handed alpha
Helix 53	AF8	B	499	520	Right-handed alpha
Helix 54	AF9	B	521	530	Right-handed alpha
Helix 55	AG1	B	532	549	Right-handed alpha
Helix 56	AG2	B	550	553	Right-handed 310
Helix 57	AG3	B	569	584	Right-handed alpha
Helix 58	AG4	B	604	619	Right-handed alpha
Helix 59	AG5	B	620	623	Right-handed 310
Helix 60	AG6	B	630	638	Right-handed alpha
Helix 61	AG7	B	643	657	Right-handed alpha
Helix 62	AG8	B	658	669	Right-handed alpha
Helix 63	AG9	B	670	677	Right-handed alpha
Helix 64	AH1	B	678	680	Right-handed 310
Helix 65	AH2	B	685	698	Right-handed alpha
Helix 66	AH3	B	702	710	Right-handed alpha
Helix 67	AH4	B	711	721	Right-handed alpha
Helix 68	AH5	B	732	735	Right-handed 310
Helix 69	AH6	B	736	750	Right-handed alpha
Helix 70	AH7	B	752	762	Right-handed alpha
Helix 71	AH8	B	763	774	Right-handed alpha
Helix 72	AH9	B	777	792	Right-handed alpha
Helix 73	AI1	B	795	805	Right-handed alpha
Helix 74	AI2	B	806	813	Right-handed alpha
Helix 75	AI3	B	814	817	Right-handed 310
Helix 76	AI4	B	819	834	Right-handed alpha
Helix 77	AI5	B	840	856	Right-handed alpha
Helix 78	AI6	B	857	860	Right-handed 310
Helix 79	AI7	B	862	880	Right-handed alpha
Helix 80	AI8	B	880	894	Right-handed alpha
Helix 81	AI9	B	940	952	Right-handed alpha
Helix 82	AJ1	B	956	976	Right-handed alpha
Helix 83	AJ2	B	980	991	Right-handed alpha
Helix 84	AJ3	B	1117	1123	Right-handed alpha
Helix 85	AJ4	B	1124	1127	Right-handed 310
Helix 86	AJ5	B	1152	1160	Right-handed alpha
Helix 87	AJ6	B	1161	1171	Right-handed alpha
Helix 88	AJ7	B	1359	1362	Right-handed 310

There are 18 sheets in PDB entry 6ZPN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	322	first strand
Strand 2	A	256	264	parallel
Strand 3	A	344	351	parallel
Strand 4	A	389	394	parallel
Strand 5	A	434	438	parallel
Strand 6	A	557	558	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	366	first strand
Strand 2	A	373	376	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1175	1181	first strand
Strand 2	A	1489	1494	anti-parallel
Strand 3	A	1479	1484	anti-parallel
Strand 4	A	1468	1473	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1186	1191	first strand
Strand 2	A	1197	1202	anti-parallel
Strand 3	A	1207	1211	anti-parallel
Strand 4	A	1219	1221	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1231	1237	first strand
Strand 2	A	1244	1249	anti-parallel
Strand 3	A	1253	1257	anti-parallel
Strand 4	A	1268	1273	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1288	1292	first strand
Strand 2	A	1297	1301	anti-parallel
Strand 3	A	1306	1311	anti-parallel
Strand 4	A	1316	1322	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1329	1334	first strand
Strand 2	A	1341	1346	anti-parallel
Strand 3	A	1350	1355	anti-parallel
Strand 4	A	1364	1369	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1376	1381	first strand
Strand 2	A	1389	1393	anti-parallel
Strand 3	A	1397	1401	anti-parallel
Strand 4	A	1408	1413	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1419	1424	first strand
Strand 2	A	1430	1435	anti-parallel
Strand 3	A	1439	1444	anti-parallel
Strand 4	A	1449	1453	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	322	first strand
Strand 2	B	256	263	parallel
Strand 3	B	344	350	parallel
Strand 4	B	389	394	parallel
Strand 5	B	434	438	parallel
Strand 6	B	557	558	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	366	first strand
Strand 2	B	373	376	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1172	1181	first strand
Strand 2	B	1489	1496	anti-parallel
Strand 3	B	1479	1484	anti-parallel
Strand 4	B	1468	1473	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1186	1191	first strand
Strand 2	B	1197	1202	anti-parallel
Strand 3	B	1207	1211	anti-parallel
Strand 4	B	1219	1221	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1231	1237	first strand
Strand 2	B	1244	1249	anti-parallel
Strand 3	B	1253	1257	anti-parallel
Strand 4	B	1268	1273	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1288	1292	first strand
Strand 2	B	1297	1301	anti-parallel
Strand 3	B	1306	1311	anti-parallel
Strand 4	B	1319	1322	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1329	1334	first strand
Strand 2	B	1341	1346	anti-parallel
Strand 3	B	1350	1355	anti-parallel
Strand 4	B	1364	1369	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1376	1381	first strand
Strand 2	B	1389	1393	anti-parallel
Strand 3	B	1397	1401	anti-parallel
Strand 4	B	1408	1413	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1419	1424	first strand
Strand 2	B	1430	1435	anti-parallel
Strand 3	B	1439	1444	anti-parallel
Strand 4	B	1452	1453	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZPN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZPN