Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZQ6 entry

There are 2 chains in PDB entry 6ZQ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 65	GLU 583
B	GLY 65	GLN 211

There are 80 helices in PDB entry 6ZQ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	110	132	Right-handed alpha
Helix 2	AA2	A	135	137	Right-handed 310
Helix 3	AA3	A	173	183	Right-handed alpha
Helix 4	AA4	A	185	187	Right-handed 310
Helix 5	AA5	A	188	194	Right-handed alpha
Helix 6	AA6	A	201	213	Right-handed alpha
Helix 7	AA7	A	213	222	Right-handed alpha
Helix 8	AA8	A	230	239	Right-handed alpha
Helix 9	AA9	A	253	258	Right-handed alpha
Helix 10	AB1	A	270	278	Right-handed alpha
Helix 11	AB2	A	303	307	Right-handed 310
Helix 12	AB3	A	317	325	Right-handed alpha
Helix 13	AB4	A	383	392	Right-handed alpha
Helix 14	AB5	A	399	410	Right-handed alpha
Helix 15	AB6	A	446	474	Right-handed alpha
Helix 16	AB7	A	484	488	Right-handed 310
Helix 17	AB8	A	489	501	Right-handed alpha
Helix 18	AB9	A	511	525	Right-handed alpha
Helix 19	AC1	A	530	539	Right-handed alpha
Helix 20	AC2	A	559	578	Right-handed alpha
Helix 21	AC3	B	110	132	Right-handed alpha
Helix 22	AC4	B	135	137	Right-handed 310
Helix 23	AC5	B	173	182	Right-handed alpha
Helix 24	AC6	B	185	187	Right-handed 310
Helix 25	AC7	B	188	194	Right-handed alpha
Helix 26	AC8	B	201	213	Right-handed alpha
Helix 27	AC9	B	213	222	Right-handed alpha
Helix 28	AD1	B	230	239	Right-handed alpha
Helix 29	AD2	B	253	257	Right-handed alpha
Helix 30	AD3	B	270	278	Right-handed alpha
Helix 31	AD4	B	303	307	Right-handed 310
Helix 32	AD5	B	317	325	Right-handed alpha
Helix 33	AD6	B	383	393	Right-handed alpha
Helix 34	AD7	B	399	410	Right-handed alpha
Helix 35	AD8	B	446	474	Right-handed alpha
Helix 36	AD9	B	484	488	Right-handed 310
Helix 37	AE1	B	489	501	Right-handed alpha
Helix 38	AE2	B	511	525	Right-handed alpha
Helix 39	AE3	B	530	539	Right-handed alpha
Helix 40	AE4	B	559	578	Right-handed alpha
Helix 41	AE5	C	110	132	Right-handed alpha
Helix 42	AE6	C	135	137	Right-handed 310
Helix 43	AE7	C	173	183	Right-handed alpha
Helix 44	AE8	C	185	187	Right-handed 310
Helix 45	AE9	C	188	194	Right-handed alpha
Helix 46	AF1	C	201	213	Right-handed alpha
Helix 47	AF2	C	213	222	Right-handed alpha
Helix 48	AF3	C	230	239	Right-handed alpha
Helix 49	AF4	C	253	257	Right-handed alpha
Helix 50	AF5	C	270	278	Right-handed alpha
Helix 51	AF6	C	303	307	Right-handed 310
Helix 52	AF7	C	317	325	Right-handed alpha
Helix 53	AF8	C	383	393	Right-handed alpha
Helix 54	AF9	C	399	410	Right-handed alpha
Helix 55	AG1	C	446	474	Right-handed alpha
Helix 56	AG2	C	484	488	Right-handed 310
Helix 57	AG3	C	489	501	Right-handed alpha
Helix 58	AG4	C	511	525	Right-handed alpha
Helix 59	AG5	C	530	539	Right-handed alpha
Helix 60	AG6	C	559	578	Right-handed alpha
Helix 61	AG7	D	110	132	Right-handed alpha
Helix 62	AG8	D	135	137	Right-handed 310
Helix 63	AG9	D	173	183	Right-handed alpha
Helix 64	AH1	D	185	187	Right-handed 310
Helix 65	AH2	D	188	194	Right-handed alpha
Helix 66	AH3	D	201	213	Right-handed alpha
Helix 67	AH4	D	213	222	Right-handed alpha
Helix 68	AH5	D	230	239	Right-handed alpha
Helix 69	AH6	D	240	244	Right-handed 310
Helix 70	AH7	D	253	257	Right-handed alpha
Helix 71	AH8	D	270	278	Right-handed alpha
Helix 72	AH9	D	317	325	Right-handed alpha
Helix 73	AI1	D	383	392	Right-handed alpha
Helix 74	AI2	D	399	410	Right-handed alpha
Helix 75	AI3	D	446	474	Right-handed alpha
Helix 76	AI4	D	484	488	Right-handed 310
Helix 77	AI5	D	489	501	Right-handed alpha
Helix 78	AI6	D	511	525	Right-handed alpha
Helix 79	AI7	D	530	540	Right-handed alpha
Helix 80	AI8	D	559	578	Right-handed alpha

There are 27 sheets in PDB entry 6ZQ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	96	first strand
Strand 2	A	77	83	anti-parallel
Strand 3	A	67	73	anti-parallel
Strand 4	A	139	146	parallel
Strand 5	A	311	316	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	165	166	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	155	first strand
Strand 2	A	225	229	anti-parallel
Strand 3	A	284	285	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	252	first strand
Strand 2	A	288	290	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	268	269	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	364	first strand
Strand 2	A	373	380	anti-parallel
Strand 3	A	341	348	anti-parallel
Strand 4	A	332	337	anti-parallel
Strand 5	A	479	483	parallel
Strand 6	A	504	505	parallel
Strand 7	A	553	554	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	417	419	first strand
Strand 2	A	437	439	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	96	first strand
Strand 2	B	77	83	anti-parallel
Strand 3	B	67	73	anti-parallel
Strand 4	B	139	146	parallel
Strand 5	B	311	316	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	165	166	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	155	first strand
Strand 2	B	225	229	anti-parallel
Strand 3	B	284	285	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	252	first strand
Strand 2	B	288	290	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	263	first strand
Strand 2	B	268	269	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	364	first strand
Strand 2	B	373	380	anti-parallel
Strand 3	B	341	348	anti-parallel
Strand 4	B	332	337	anti-parallel
Strand 5	B	479	483	parallel
Strand 6	B	504	505	parallel
Strand 7	B	553	554	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	419	first strand
Strand 2	B	437	439	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	96	first strand
Strand 2	C	77	83	anti-parallel
Strand 3	C	67	73	anti-parallel
Strand 4	C	139	146	parallel
Strand 5	C	311	316	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	109	first strand
Strand 2	C	165	166	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	155	first strand
Strand 2	C	225	229	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	252	first strand
Strand 2	C	288	290	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	359	364	first strand
Strand 2	C	373	380	anti-parallel
Strand 3	C	341	348	anti-parallel
Strand 4	C	332	337	anti-parallel
Strand 5	C	479	483	parallel
Strand 6	C	504	505	parallel
Strand 7	C	553	554	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	417	419	first strand
Strand 2	C	437	439	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	96	first strand
Strand 2	D	77	83	anti-parallel
Strand 3	D	67	73	anti-parallel
Strand 4	D	139	146	parallel
Strand 5	D	311	316	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	109	first strand
Strand 2	D	165	166	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	155	first strand
Strand 2	D	225	229	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	250	252	first strand
Strand 2	D	288	290	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	268	269	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	359	364	first strand
Strand 2	D	373	380	anti-parallel
Strand 3	D	341	348	anti-parallel
Strand 4	D	332	337	anti-parallel
Strand 5	D	479	483	parallel
Strand 6	D	504	505	parallel
Strand 7	D	553	554	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	419	first strand
Strand 2	D	437	439	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZQ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQ6