Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZQ7 entry

There is 1 chain in PDB entry 6ZQ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 65ARG 582
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6ZQ7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
110 132Right-handed alpha
Helix 2
AA2
A
135 137Right-handed 310
Helix 3
AA3
A
173 183Right-handed alpha
Helix 4
AA4
A
184 188Right-handed 310
Helix 5
AA5
A
189 194Right-handed alpha
Helix 6
AA6
A
201 210Right-handed alpha
Helix 7
AA7
A
213 222Right-handed alpha
Helix 8
AA8
A
230 239Right-handed alpha
Helix 9
AA9
A
240 244Right-handed 310
Helix 10
AB1
A
253 257Right-handed alpha
Helix 11
AB2
A
270 277Right-handed alpha
Helix 12
AB3
A
317 325Right-handed alpha
Helix 13
AB4
A
383 393Right-handed alpha
Helix 14
AB5
A
399 409Right-handed alpha
Helix 15
AB6
A
446 474Right-handed alpha
Helix 16
AB7
A
484 488Right-handed 310
Helix 17
AB8
A
489 501Right-handed alpha
Helix 18
AB9
A
511 525Right-handed alpha
Helix 19
AC1
A
531 540Right-handed alpha
Helix 20
AC2
A
559 578Right-handed alpha
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There are 7 sheets in PDB entry 6ZQ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 96first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
67 73anti-parallel
Strand 4
A
139 146parallel
Strand 5
A
311 316parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 109first strand
Strand 2
A
165 166anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
151 155first strand
Strand 2
A
225 229anti-parallel
Strand 3
A
284 285parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
250 252first strand
Strand 2
A
288 290parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
262 263first strand
Strand 2
A
268 269anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
359 364first strand
Strand 2
A
373 380anti-parallel
Strand 3
A
341 346anti-parallel
Strand 4
A
332 337anti-parallel
Strand 5
A
479 483parallel
Strand 6
A
504 505parallel
Strand 7
A
553 554anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
417 419first strand
Strand 2
A
437 439anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il