Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZQI entry

There are 3 chains in PDB entry 6ZQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1SER 504
B
 VAL 1HIS 101
C
 SER 120SER 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6ZQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 86Right-handed 310
Helix 2
AA2
A
100 104Right-handed 310
Helix 3
AA3
A
131 133Right-handed 310
Helix 4
AA4
A
216 220Right-handed alpha
Helix 5
AA5
A
240 242Right-handed 310
Helix 6
AA6
A
262 270Right-handed alpha
Helix 7
AA7
A
392 396Right-handed 310
Helix 8
AA8
A
406 425Right-handed alpha
Helix 9
AA9
A
437 458Right-handed alpha
Helix 10
AB1
A
464 479Right-handed alpha
Helix 11
AB2
A
485 502Right-handed alpha
Helix 12
AB3
C
122 133Right-handed alpha
Helix 13
AB4
C
133 146Right-handed alpha
Helix 14
AB5
C
150 165Right-handed alpha
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There are 12 sheets in PDB entry 6ZQI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
31 34parallel
Strand 3
A
41 50anti-parallel
Strand 4
A
135 143anti-parallel
Strand 5
A
165 171anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
31 34parallel
Strand 3
A
41 50anti-parallel
Strand 4
A
282 285anti-parallel
Strand 5
A
277 279anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 25first strand
Strand 2
A
290 295anti-parallel
Strand 3
A
186 192anti-parallel
Strand 4
A
176 180anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
120 128anti-parallel
Strand 4
A
202 207anti-parallel
Strand 5
A
210 215anti-parallel
Strand 6
A
274 275anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
110 118anti-parallel
Strand 3
A
90 98anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 246first strand
Strand 2
A
256 258anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
340 341parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 315first strand
Strand 2
A
327 334anti-parallel
Strand 3
A
320 321anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 315first strand
Strand 2
A
327 334anti-parallel
Strand 3
A
372 380anti-parallel
Strand 4
A
358 359anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 347first strand
Strand 2
A
384 390anti-parallel
Strand 3
A
397 403anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
10 13anti-parallel
Strand 3
B
74 79parallel
Strand 4
B
48 53anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 26first strand
Strand 2
B
31 36anti-parallel
Strand 3
B
67 69anti-parallel
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