Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZQV entry

There are 6 chains in PDB entry 6ZQV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 1	SER 504
B	ILE 96	SER 169
C	ILE 1	SER 504
D	ILE 96	SER 169
E	ILE 1	SER 504
F	ILE 96	SER 169

There are 51 helices in PDB entry 6ZQV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	82	87	Right-handed 310
Helix 2	AA2	A	131	133	Right-handed 310
Helix 3	AA3	A	148	152	Right-handed 310
Helix 4	AA4	A	182	184	Right-handed 310
Helix 5	AA5	A	198	200	Right-handed 310
Helix 6	AA6	A	216	221	Right-handed alpha
Helix 7	AA7	A	239	242	Right-handed 310
Helix 8	AA8	A	262	270	Right-handed alpha
Helix 9	AA9	A	406	426	Right-handed alpha
Helix 10	AB1	A	427	432	Right-handed 310
Helix 11	AB2	A	437	459	Right-handed alpha
Helix 12	AB3	A	462	479	Right-handed alpha
Helix 13	AB4	A	485	501	Right-handed alpha
Helix 14	AB5	B	114	118	Right-handed 310
Helix 15	AB6	B	119	132	Right-handed alpha
Helix 16	AB7	B	133	148	Right-handed alpha
Helix 17	AB8	B	150	165	Right-handed alpha
Helix 18	AB9	C	82	87	Right-handed 310
Helix 19	AC1	C	131	133	Right-handed 310
Helix 20	AC2	C	148	152	Right-handed 310
Helix 21	AC3	C	182	184	Right-handed 310
Helix 22	AC4	C	198	200	Right-handed 310
Helix 23	AC5	C	216	221	Right-handed alpha
Helix 24	AC6	C	239	242	Right-handed 310
Helix 25	AC7	C	262	270	Right-handed alpha
Helix 26	AC8	C	392	396	Right-handed 310
Helix 27	AC9	C	406	426	Right-handed alpha
Helix 28	AD1	C	427	432	Right-handed 310
Helix 29	AD2	C	437	459	Right-handed alpha
Helix 30	AD3	C	462	479	Right-handed alpha
Helix 31	AD4	C	485	501	Right-handed alpha
Helix 32	AD5	D	114	118	Right-handed 310
Helix 33	AD6	D	119	133	Right-handed alpha
Helix 34	AD7	D	134	148	Right-handed alpha
Helix 35	AD8	D	150	165	Right-handed alpha
Helix 36	AD9	E	82	87	Right-handed 310
Helix 37	AE1	E	148	152	Right-handed 310
Helix 38	AE2	E	182	184	Right-handed 310
Helix 39	AE3	E	198	200	Right-handed 310
Helix 40	AE4	E	216	220	Right-handed alpha
Helix 41	AE5	E	239	242	Right-handed 310
Helix 42	AE6	E	262	270	Right-handed alpha
Helix 43	AE7	E	406	426	Right-handed alpha
Helix 44	AE8	E	427	432	Right-handed 310
Helix 45	AE9	E	437	459	Right-handed alpha
Helix 46	AF1	E	462	479	Right-handed alpha
Helix 47	AF2	E	485	501	Right-handed alpha
Helix 48	AF3	F	114	118	Right-handed 310
Helix 49	AF4	F	119	133	Right-handed alpha
Helix 50	AF5	F	133	148	Right-handed alpha
Helix 51	AF6	F	150	165	Right-handed alpha

There are 23 sheets in PDB entry 6ZQV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	31	34	parallel
Strand 3	A	41	50	anti-parallel
Strand 4	A	282	285	anti-parallel
Strand 5	A	274	279	anti-parallel
Strand 6	A	210	215	anti-parallel
Strand 7	A	202	207	anti-parallel
Strand 8	A	109	129	anti-parallel
Strand 9	A	135	143	first strand
Strand 10	A	165	170	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	99	first strand
Strand 2	A	109	129	anti-parallel
Strand 3	A	202	207	anti-parallel
Strand 4	A	210	215	anti-parallel
Strand 5	A	274	279	anti-parallel
Strand 6	A	282	285	anti-parallel
Strand 7	A	41	50	anti-parallel
Strand 8	A	54	72	first strand
Strand 9	A	226	228	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	26	first strand
Strand 2	A	289	295	anti-parallel
Strand 3	A	186	191	anti-parallel
Strand 4	A	176	180	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	248	first strand
Strand 2	A	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	315	first strand
Strand 2	A	327	334	anti-parallel
Strand 3	A	320	321	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	315	first strand
Strand 2	A	327	334	anti-parallel
Strand 3	A	372	380	anti-parallel
Strand 4	A	358	359	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	341	first strand
Strand 2	A	365	366	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	347	first strand
Strand 2	A	384	390	anti-parallel
Strand 3	A	397	403	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	13	first strand
Strand 2	C	30	34	parallel
Strand 3	C	41	50	anti-parallel
Strand 4	C	282	285	anti-parallel
Strand 5	C	274	279	anti-parallel
Strand 6	C	210	215	anti-parallel
Strand 7	C	202	207	anti-parallel
Strand 8	C	109	129	anti-parallel
Strand 9	C	135	143	first strand
Strand 10	C	165	170	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	99	first strand
Strand 2	C	109	129	anti-parallel
Strand 3	C	202	207	anti-parallel
Strand 4	C	210	215	anti-parallel
Strand 5	C	274	279	anti-parallel
Strand 6	C	282	285	anti-parallel
Strand 7	C	41	50	anti-parallel
Strand 8	C	54	72	first strand
Strand 9	C	226	228	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	26	first strand
Strand 2	C	289	295	anti-parallel
Strand 3	C	186	191	anti-parallel
Strand 4	C	176	180	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	248	first strand
Strand 2	C	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	327	333	anti-parallel
Strand 3	C	320	321	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	327	333	anti-parallel
Strand 3	C	373	380	anti-parallel
Strand 4	C	358	359	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	341	first strand
Strand 2	C	365	366	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	347	first strand
Strand 2	C	384	390	anti-parallel
Strand 3	C	397	403	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	31	34	parallel
Strand 3	E	41	50	anti-parallel
Strand 4	E	282	285	anti-parallel
Strand 5	E	274	279	anti-parallel
Strand 6	E	210	215	anti-parallel
Strand 7	E	202	207	anti-parallel
Strand 8	E	109	129	anti-parallel
Strand 9	E	135	143	first strand
Strand 10	E	165	171	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	99	first strand
Strand 2	E	109	129	anti-parallel
Strand 3	E	202	207	anti-parallel
Strand 4	E	210	215	anti-parallel
Strand 5	E	274	279	anti-parallel
Strand 6	E	282	285	anti-parallel
Strand 7	E	41	50	anti-parallel
Strand 8	E	54	72	first strand
Strand 9	E	226	228	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	26	first strand
Strand 2	E	289	295	anti-parallel
Strand 3	E	186	191	anti-parallel
Strand 4	E	176	180	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	244	248	first strand
Strand 2	E	254	258	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	315	first strand
Strand 2	E	327	334	anti-parallel
Strand 3	E	320	321	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	315	first strand
Strand 2	E	327	334	anti-parallel
Strand 3	E	372	380	anti-parallel
Strand 4	E	358	359	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	344	347	first strand
Strand 2	E	384	390	anti-parallel
Strand 3	E	397	403	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZQV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZQV