Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZRE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZRE entry

There are 2 chains in PDB entry 6ZRE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 1VAL 455
B
 CYS 1GLN 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6ZRE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 38Right-handed 310
Helix 2
AA2
A
39 44Right-handed alpha
Helix 3
AA3
A
46 60Right-handed alpha
Helix 4
AA4
A
60 83Right-handed alpha
Helix 5
AA5
A
130 198Right-handed alpha
Helix 6
AA6
A
202 239Right-handed alpha
Helix 7
AA7
A
265 272Right-handed alpha
Helix 8
AA8
A
272 295Right-handed alpha
Helix 9
AA9
A
312 316Right-handed 310
Helix 10
AB1
A
338 405Right-handed alpha
Helix 11
AB2
A
412 447Right-handed alpha
Helix 12
AB3
B
34 38Right-handed 310
Helix 13
AB4
B
39 44Right-handed alpha
Helix 14
AB5
B
46 60Right-handed alpha
Helix 15
AB6
B
60 83Right-handed alpha
Helix 16
AB7
B
130 198Right-handed alpha
Helix 17
AB8
B
202 239Right-handed alpha
Helix 18
AB9
B
264 266Right-handed 310
Helix 19
AC1
B
267 272Right-handed alpha
Helix 20
AC2
B
272 294Right-handed alpha
Helix 21
AC3
B
338 405Right-handed alpha
Helix 22
AC4
B
414 446Right-handed alpha
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There are 2 sheets in PDB entry 6ZRE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 99first strand
Strand 2
A
110 125anti-parallel
Strand 3
A
299 310anti-parallel
Strand 4
A
322 331anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 99first strand
Strand 2
B
110 126anti-parallel
Strand 3
B
299 310anti-parallel
Strand 4
B
322 331anti-parallel
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