Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZSJ entry

There are 4 chains in PDB entry 6ZSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ASP 174
B
 LYS 3LYS 175
C
 VAL 1074ALA 1203
D
 VAL 1074GLU 1205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6ZSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
67 69Right-handed 310
Helix 3
AA3
A
70 75Right-handed alpha
Helix 4
AA4
A
76 78Right-handed 310
Helix 5
AA5
A
92 98Right-handed alpha
Helix 6
AA6
A
98 108Right-handed alpha
Helix 7
AA7
A
125 129Right-handed 310
Helix 8
AA8
A
132 143Right-handed alpha
Helix 9
AA9
A
157 174Right-handed alpha
Helix 10
AB1
B
20 31Right-handed alpha
Helix 11
AB2
B
67 69Right-handed 310
Helix 12
AB3
B
70 76Right-handed alpha
Helix 13
AB4
B
92 98Right-handed alpha
Helix 14
AB5
B
98 110Right-handed alpha
Helix 15
AB6
B
125 129Right-handed 310
Helix 16
AB7
B
132 144Right-handed alpha
Helix 17
AB8
B
157 174Right-handed alpha
Helix 18
AB9
C
1075 1105Right-handed alpha
Helix 19
AC1
C
1109 1161Right-handed alpha
Helix 20
AC2
C
1168 1203Right-handed alpha
Helix 21
AC3
D
1075 1106Right-handed alpha
Helix 22
AC4
D
1108 1161Right-handed alpha
Helix 23
AC5
D
1168 1204Right-handed alpha
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There are 2 sheets in PDB entry 6ZSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 52first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
7 14parallel
Strand 4
A
83 89parallel
Strand 5
A
115 121parallel
Strand 6
A
146 149parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 52first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
7 14parallel
Strand 4
B
83 89parallel
Strand 5
B
115 121parallel
Strand 6
B
146 149parallel
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